RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 C17orf78Q8N4C9 275 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 STEAP2Q8NFT2 490 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 OR4F15Q8NGB8 312 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 LGALS12Q96DT0 336 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 BOD1Q96IK1 185 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 ASH2LQ9UBL3 628 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 WIPF3A6NGB9 483 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 OR5H1A6NKK0 313 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 HOXC12P31275 282 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 ATP6V1E1P36543 226 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 POU4F2Q12837 409 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 SLC16A9Q7RTY1 509 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 DPY19L4Q7Z388 723 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 WDR31Q8NA23 367 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 OR52N5Q8NH56 324 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 LRRC46Q96FV0 321 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 NOX3Q9HBY0 568 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 PLCXD1Q9NUJ7 323 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 KCNG2Q9UJ96 466 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 LRCH1Q9Y2L9 728 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 DOPEY1Q5JWR5 2465 aa20.54■□□□□ 0.88
TMEM260-202ENST00000538838 SPTBN1Q01082 2364 aaKnown RBP20.53■□□□□ 0.88
TMEM260-202ENST00000538838 C12orf71A8MTZ7 269 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 SLC15A1P46059 708 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 HCCSP53701 268 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 UBE2NP61088 152 aaKnown RBP20.53■□□□□ 0.88
TMEM260-202ENST00000538838 PIGFQ07326 219 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 CDADC1Q9BWV3 514 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 CYB5R1Q9UHQ9 305 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 ADGRG4Q8IZF6 3080 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 CD79AP11912 226 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 CXCR4P61073 352 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 AQP6Q13520 282 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 SNTB1Q13884 538 aaKnown RBP20.53■□□□□ 0.88
TMEM260-202ENST00000538838 PCK2Q16822 640 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 SLC18B1Q6NT16 456 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 SLC35F2Q8IXU6 374 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 RFLNBQ8N5W9 214 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 TBX5Q99593 518 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 CCNB1IP1Q9NPC3 277 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 NPDC1Q9NQX5 325 aaPredicted RBP20.53■□□□□ 0.88
TMEM260-202ENST00000538838 PSORS1C1Q9UIG5 152 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 KLHDC2Q9Y2U9 406 aa20.53■□□□□ 0.88
TMEM260-202ENST00000538838 ARPC4-TTLL3A0A0A6YYG9 625 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 MMP7P09237 267 aaPredicted RBP20.52■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF32P17041 273 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 RAB40BQ12829 278 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 SLC36A2Q495M3 483 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 TEX30Q5JUR7 227 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 TIMM23BQ5SRD1 257 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 CFAP77Q6ZQR2 320 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 C22orf34Q6ZV56 151 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 AHSA2Q719I0 299 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 CDC20BQ86Y33 519 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 OR52I1Q8NGK6 324 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 SSC4DQ8WTU2 575 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 NANOS1Q8WY41 292 aaKnown RBP20.52■□□□□ 0.88
TMEM260-202ENST00000538838 GGHQ92820 318 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 KCNN2Q9H2S1 579 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 MRPS18AQ9NVS2 196 aaKnown RBP20.52■□□□□ 0.88
TMEM260-202ENST00000538838 COPS3Q9UNS2 423 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 EXOGQ9Y2C4 368 aaKnown RBP20.52■□□□□ 0.88
TMEM260-202ENST00000538838 MYRFQ9Y2G1 1151 aa20.52■□□□□ 0.88
TMEM260-202ENST00000538838 UBL3O95164 117 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 WNT11O96014 354 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 TAB1Q15750 504 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 DCXRQ7Z4W1 244 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 ZNF540Q8NDQ6 660 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 OR10H4Q8NGA5 316 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 OR2AJ1Q8NGZ0 328 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 OTOSQ8NHW6 89 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 TTTY10Q9BZA0 68 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 YIPF3Q9GZM5 350 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 RNF121Q9H920 327 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 PAK1IP1Q9NWT1 392 aaPredicted RBP20.51■□□□□ 0.87
TMEM260-202ENST00000538838 SCN3BQ9NY72 215 aa20.51■□□□□ 0.87
TMEM260-202ENST00000538838 GDF2Q9UK05 429 aaPredicted RBP20.51■□□□□ 0.87
TMEM260-202ENST00000538838 CLEC18AA5D8T8 446 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 J3QRE1 110 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 RER1O15258 196 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 CCDC159P0C7I6 412 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 HOXB1P14653 301 aaPredicted RBP20.5■□□□□ 0.87
TMEM260-202ENST00000538838 CRHBPP24387 322 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 EIF2B1Q14232 305 aaKnown RBP20.5■□□□□ 0.87
TMEM260-202ENST00000538838 GSG1Q2KHT4 349 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 RBM48Q5RL73 367 aaKnown RBP20.5■□□□□ 0.87
TMEM260-202ENST00000538838 TMEM154Q6P9G4 183 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 CLEC18BQ6UXF7 455 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 MDP1Q86V88 176 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 CLEC18CQ8NCF0 446 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 SGCDQ92629 289 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 MAP6Q96JE9 813 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 AMELYQ99218 206 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 OR10A4Q9H209 315 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 B3GNT2Q9NY97 397 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 AMDHD2Q9Y303 409 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 SLC25A15Q9Y619 301 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 PRR14LQ5THK1 2151 aa20.5■□□□□ 0.87
TMEM260-202ENST00000538838 EFCAB10A6NFE3 127 aa20.49■□□□□ 0.87
TMEM260-202ENST00000538838 PTGES3LE9PB15 166 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms