RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 FAM71CQ8NEG0 241 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 OR10K1Q8NGX5 313 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 SGCDQ92629 289 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 DHRS1Q96LJ7 313 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 COMMD4Q9H0A8 199 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 MYRFQ9Y2G1 1151 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 A0A087WZY1 265 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 VAMP5O95183 116 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 PLAUP00749 431 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 GLI4P10075 376 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 GTF2A1P52655 376 aaPredicted RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 ATP6AP1Q15904 470 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 SLC22A6Q4U2R8 563 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 RBM48Q5RL73 367 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 FBXW9Q5XUX1 488 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 HACD2Q6Y1H2 254 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 CMIPQ8IY22 773 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MDS2Q8NDY4 140 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 NMD3Q96D46 503 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 C4orf36Q96KX1 117 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 OR5M11Q96RB7 305 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 CNN2Q99439 309 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 ERVK-18Q9QC07 812 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 ZNF639Q9UID6 485 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 FAM172BPA6NC97 362 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 HPRP00739 348 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 ERCC1P07992 297 aaPredicted RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 ZNF44P15621 663 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 NDUFB7P17568 137 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 GBX2P52951 348 aaPredicted RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 CLDN12P56749 244 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 PPP2R2BQ00005 443 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 TEKQ02763 1124 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 PLCXD3Q63HM9 321 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 DHRS4L2Q6PKH6 230 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 FBXL14Q8N1E6 418 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 ACBD7Q8N6N7 88 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 METTL25Q8N6Q8 603 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 TMEM171Q8WVE6 324 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 SPTSSAQ969W0 71 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 TMEM41AQ96HV5 264 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 SPRY4Q9C004 299 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 RACGAP1Q9H0H5 632 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MUC13Q9H3R2 512 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 C1orf198Q9H425 327 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 TCF7L1Q9HCS4 588 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 FLVCR1Q9Y5Y0 555 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 EML6Q6ZMW3 1958 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 PRSS37A4D1T9 235 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 PLPP3O14495 311 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 RGS10O43665 173 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MSR1P21757 451 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 CA6P23280 308 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 AZGP1P25311 298 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 CAPGP40121 348 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 RNPS1Q15287 305 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 TBC1D28Q2M2D7 210 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MFSD8Q8NHS3 518 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 ASB5Q8WWX0 329 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 MRPL48Q96GC5 212 aaKnown RBP6.39□□□□□ -1.39
MSH6-209ENST00000538136 FBXL3Q9UKT7 428 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 KLK4Q9Y5K2 254 aa6.39□□□□□ -1.39
MSH6-209ENST00000538136 A6NIZ1 184 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 FTCDNL1E5RQL4 147 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 CLPTM1O96005 669 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 WNT11O96014 354 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 NGFP01138 241 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 NAT2P11245 290 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 GABRR1P24046 479 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 LHX2P50458 406 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 RAP1BP61224 184 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 RAP1AP62834 184 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 LCN1P1Q5VSP4 162 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 CREB3L2Q70SY1 520 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZNF227Q86WZ6 799 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 SLC30A7Q8NEW0 376 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR8J1Q8NGP2 316 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR51E1Q8TCB6 317 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 TSPAN32Q96QS1 320 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 MICU1Q9BPX6 476 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR2J1Q9GZK6 312 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZMAT3Q9HA38 289 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 POLE3Q9NRF9 147 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 GPR173Q9NS66 373 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 FAM118AQ9NWS6 357 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZNF629Q9UEG4 869 aaPredicted RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 RASD1Q9Y272 281 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 A0A1W2PNV4 684 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 M0R135 149 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 SLC2A5P22732 501 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 GNB2P62879 340 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 SCRN3Q0VDG4 424 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR8D4Q8NGM9 314 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZNF799Q96GE5 643 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 SLITRK2Q9H156 845 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZNF385DQ9H6B1 395 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 PAQR5Q9NXK6 330 aaPredicted RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 CKLFQ9UBR5 152 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms