RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 C17orf107Q6ZR85 190 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 COX15Q7KZN9 410 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF101Q8IZC7 436 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 LRRC18Q8N456 261 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM156Q8N614 296 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 APCDD1LQ8NCL9 501 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 FXYD6Q9H0Q3 95 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 A0A1B0GVI7 797 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 A0A1W2PQ72 361 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 GPR171O14626 319 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 FADS1O60427 444 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 RAMP1O60894 148 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 PLATP00750 562 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 CD3DP04234 171 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 PTBP1P26599 531 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 HSD11B1P28845 292 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 EPHA4P54764 986 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 AP3S2P59780 193 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 RASGEF1BQ0VAM2 473 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 MYBPHQ13203 477 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 IL10RAQ13651 578 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 KLF9Q13886 244 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 NR0B2Q15466 257 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 H1FNTQ75WM6 255 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 KCTD20Q7Z5Y7 419 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 ZC3HAV1LQ96H79 300 aaKnown RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 GPER1Q99527 375 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 TWSG1Q9GZX9 223 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 CLEC4MQ9H2X3 399 aaPredicted RBP7.81□□□□□ -1.16
UBE3B-208ENST00000538070 STEAP1Q9UHE8 339 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 SRPK3Q9UPE1 567 aa7.81□□□□□ -1.16
UBE3B-208ENST00000538070 IGHV5-10-1A0A0J9YXX1 117 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM235A6NFC5 223 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 GABARAPH6UMI1 98 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 PYCARD-AS1I3L0S3 204 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 PRSS3P35030 304 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 GPR85P60893 370 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 RPS18P62269 152 aaKnown RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 MFAP5Q13361 173 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 BTN2A1Q7KYR7 527 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CPEB2Q7Z5Q1 589 aaKnown RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 GHITMQ9H3K2 345 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 AKAP7Q9P0M2 348 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR52A1Q9UKL2 312 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 FRYQ5TBA9 3013 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 DNAJC13O75165 2243 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 BDP1A6H8Y1 2624 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 F5H5K5 113 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ACOT7O00154 380 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ABHD16AO95870 558 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 WDPCPO95876 746 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 TRAPPC2P0DI81 140 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 TRAPPC2BP0DI82 140 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 RHBDD2Q6NTF9 364 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 C17orf82Q86X59 251 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 TCTE3Q8IZS6 198 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 EXD3Q8N9H8 876 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 TEX19Q8NA77 164 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR11G2Q8NGC1 345 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR6N1Q8NGY5 312 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 DDIT4LQ96D03 193 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 MSANTD3Q96H12 275 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 GPX7Q96SL4 187 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 WDR77Q9BQA1 342 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 SOX7Q9BT81 388 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CHRDQ9H2X0 955 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 EVA1AQ9H8M9 152 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 UCK1Q9HA47 277 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ASH2LQ9UBL3 628 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ITGB1BP2Q9UKP3 347 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF726A6NNF4 738 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 MS4A18H0YCH9 400 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ZFAND5O76080 213 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CRABP1P29762 137 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 LCN1P31025 176 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OTX2P32243 289 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 MS4A18Q3C1V0 323 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 LAMTOR1Q6IAA8 161 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 UNQ9370/PRO34162Q6UXP9 181 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR4C16Q8NGL9 310 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR1J4Q8NGS1 313 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 OR2AJ1Q8NGZ0 328 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 IFI44Q8TCB0 444 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 C11orf40Q8WZ69 217 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 MIB2Q96AX9 1013 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 HAVCR1Q96D42 359 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CDX2Q99626 313 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 SLA2Q9H6Q3 261 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 CA10Q9NS85 328 aa7.8□□□□□ -1.16
UBE3B-208ENST00000538070 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
UBE3B-208ENST00000538070 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SYT7O43581 403 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 AMY2AP04746 511 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF43P17038 809 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms