RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GIFP27352 417 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 APEX1P27695 318 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 SDHAP31040 664 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 PCBD1P61457 104 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 ERVK-25P63136 954 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 GALK2Q01415 458 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 PLP2Q04941 152 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 CD47Q08722 323 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 TRIM25Q14258 630 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 MESTQ5EB52 335 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 LCN8Q6JVE9 175 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 KRT80Q6KB66 452 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 C1orf94Q6P1W5 598 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 THSD4Q6ZMP0 1018 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 ADCK1Q86TW2 530 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 IGFN1Q86VF2 1251 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 MEX3DQ86XN8 651 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 SVOPLQ8N434 492 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 CPEB3Q8NE35 698 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 UTP4Q969X6 686 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 RSRC1Q96IZ7 334 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 POM121L2Q96KW2 1035 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 Q96M85 177 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 SNX18Q96RF0 628 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 CADM1Q9BY67 442 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 MRPL37Q9BZE1 423 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 BCL2L14Q9BZR8 327 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 TRIM15Q9C019 465 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 KCNN2Q9H2S1 579 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 MS4A5Q9H3V2 200 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 MAGIXQ9H6Y5 334 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 DCLRE1BQ9H816 532 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 GRHPRQ9UBQ7 328 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 PRPF19Q9UMS4 504 aaKnown RBP10.67□□□□□ -0.7
PRKDC-207ENST00000536483 ADAM18Q9Y3Q7 739 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 TIMM10BQ9Y5J6 103 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 TEX13CA0A0J9YWL9 993 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 IQCMA0A1B0GVH7 501 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 UNC119BA6NIH7 251 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 TCF21O43680 179 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 DIRAS1O95057 198 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 ERCC1P07992 297 aaPredicted RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 TACSTD2P09758 323 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 COX5BP10606 129 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF32P17041 273 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 CDAP32320 146 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 RPL4P36578 427 aaKnown RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 RAD52P43351 418 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 GSSP48637 474 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 CHN2P52757 468 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 UCP2P55851 309 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 PSG4Q00888 419 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 TOP3AQ13472 1001 aaPredicted RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 ENDOGQ14249 297 aaKnown RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 KCNMB1Q16558 191 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 TBC1D28Q2M2D7 210 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 RFX4Q33E94 735 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 PABPC1L2AQ5JQF8 200 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 FGD3Q5JSP0 725 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 SMARCD3Q6STE5 483 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF786Q8N393 782 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 PAQR4Q8N4S7 273 aaPredicted RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 LINC00471Q8N535 108 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 RFLNBQ8N5W9 214 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 CLDN22Q8N7P3 220 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 LINC01356Q8N9X3 169 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 RNF121Q9H920 327 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 POLE4Q9NR33 117 aa10.66□□□□□ -0.7
PRKDC-207ENST00000536483 TMEFF2Q9UIK5 374 aaPredicted RBP10.66□□□□□ -0.7
PRKDC-207ENST00000536483 LYNX1G3V0Z9 82 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 XKRYO14609 159 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 IDH3BO43837 385 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 CIB2O75838 187 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 LYNX1P0DP58 116 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 ATP6V1B2P21281 511 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 MSR1P21757 451 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 TUBG1P23258 451 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 STOMP27105 288 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 LAP3P28838 519 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 IFNGR2P38484 337 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 GUCA1AP43080 201 aaPredicted RBP10.65□□□□□ -0.7
PRKDC-207ENST00000536483 LSM6P62312 80 aaKnown RBP10.65□□□□□ -0.7
PRKDC-207ENST00000536483 MRPS11P82912 194 aaKnown RBP10.65□□□□□ -0.7
PRKDC-207ENST00000536483 MS4A2Q01362 244 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 TSPAN31Q12999 210 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 GK3PQ14409 553 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 TRIP10Q15642 601 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 SGCAQ16586 387 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
PRKDC-207ENST00000536483 ZDHHC21Q8IVQ6 265 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 LRRC18Q8N456 261 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 OR52J3Q8NH60 311 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 UBASH3BQ8TF42 649 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 NSMAFQ92636 917 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 HPS1Q92902 700 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 WNT5BQ9H1J7 359 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 RNPEPL1Q9HAU8 725 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms