RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PLP2Q04941 152 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 TRAP1Q12931 704 aaKnown RBP11.31□□□□□ -0.6
PRKDC-206ENST00000536429 BNIP1Q12981 228 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 SLC35F1Q5T1Q4 408 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 LEG1Q6P5S2 330 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 AQP11Q8NBQ7 271 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 NMNAT3Q96T66 252 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
PRKDC-206ENST00000536429 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 FN3KQ9H479 309 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 SAMHD1Q9Y3Z3 626 aaKnown RBP11.31□□□□□ -0.6
PRKDC-206ENST00000536429 SPEF1Q9Y4P9 236 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 DHRS12A0PJE2 317 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 AQP12BA6NM10 295 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 ARPC3O15145 178 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 KHDRBS3O75525 346 aaKnown RBP11.3□□□□□ -0.6
PRKDC-206ENST00000536429 SNAP29O95721 258 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 HEXAP06865 529 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 RAP2AP10114 183 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 UCP2P55851 309 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 MEP1BQ16820 701 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
PRKDC-206ENST00000536429 TMEM179BQ7Z7N9 219 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 AQP12AQ8IXF9 295 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 OR6V1Q8N148 313 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 ICA1LQ8NDH6 482 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 SDR9C7Q8NEX9 313 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 C11orf40Q8WZ69 217 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 RHNO1Q9BSD3 238 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 C1orf198Q9H425 327 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 REEP1Q9H902 201 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 POMPQ9Y244 141 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 TIMM10BQ9Y5J6 103 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 CDH10Q9Y6N8 788 aa11.3□□□□□ -0.6
PRKDC-206ENST00000536429 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 FAM171A2A8MVW0 826 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 VSTM5A8MXK1 200 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 BHLHE40O14503 412 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 GSC2O15499 205 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SOX14O95416 240 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 PTHP01270 115 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 LCKP06239 509 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 GAAP10253 952 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 GUCA1AP43080 201 aaPredicted RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 RPS23P62266 143 aaKnown RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 FLOT2Q14254 428 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 MICAQ29983 383 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SPATA46Q5T0L3 261 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 RASSF6Q6ZTQ3 369 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 GLB1L2Q8IW92 636 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 OR52E2Q8NGJ4 325 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 FAM168AQ92567 244 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 GTF3AQ92664 365 aaKnown RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SLCO4A1Q96BD0 722 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SRA1Q9HD15 236 aaKnown RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 RPRD1BQ9NQG5 326 aaKnown RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 REV1Q9UBZ9 1251 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 FKBP7Q9Y680 259 aa11.29□□□□□ -0.6
PRKDC-206ENST00000536429 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
PRKDC-206ENST00000536429 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 ABCA1O95477 2261 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 C12orf71A8MTZ7 269 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 SYNGR3O43761 229 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 STAMBPO95630 424 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 CST1P01037 141 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 NGFP01138 241 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 NAT2P11245 290 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
PRKDC-206ENST00000536429 PCSK6P29122 969 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 MPV17P39210 176 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 CENPAP49450 140 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 EVX1P49640 407 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms