RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RAD23AP54725 363 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ADAM8P78325 824 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 NAAAQ02083 359 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 SCRN3Q0VDG4 424 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 DAG1Q14118 895 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 CRMP1Q14194 572 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 PTGES3Q15185 160 aaKnown RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 OR10H5Q8NGA6 315 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 SMAP2Q8WU79 429 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 HTRA1Q92743 480 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 EME1Q96AY2 570 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 DDOQ99489 341 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 GSX2Q9BZM3 304 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 USE1Q9NZ43 259 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 CISD1Q9NZ45 108 aaKnown RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 LAMP3Q9UQV4 416 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 TIMM10BQ9Y5J6 103 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ITPR3Q14573 2671 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 PRR23D1E9PI22 279 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 EI24O14681 340 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 SURF4O15260 269 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 MITFO75030 526 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 ALPLP05186 524 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 SOD3P08294 240 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 MMP7P09237 267 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 PRR23D2P0DMB1 279 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF32P17041 273 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 APLNRP35414 380 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 AQP6Q13520 282 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 RAB39AQ14964 217 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 RCN1Q15293 331 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 Q5PR19 223 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 OR1J2Q8NGS2 313 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 FBXO17Q96EF6 278 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 PERPQ96FX8 193 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 FOXN4Q96NZ1 517 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 GABARAPL3Q9BY60 117 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 FN3KQ9H479 309 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 EMC7Q9NPA0 242 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 TMEFF2Q9UIK5 374 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-205ENST00000536255 KCNG2Q9UJ96 466 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 SPEF1Q9Y4P9 236 aa11.74□□□□□ -0.53
RPAIN-205ENST00000536255 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-205ENST00000536255 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 E7EQL1 145 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 CELA3BP08861 270 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 GAAP10253 952 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 PAX1P15863 534 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF823P16415 610 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 SPI1P17947 270 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 CADP27708 2225 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 FMO3P31513 532 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 PTH2RP49190 550 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 GALK2Q01415 458 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 TEKQ02763 1124 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 ENDOGQ14249 297 aaKnown RBP11.73□□□□□ -0.53
RPAIN-205ENST00000536255 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 TMEM236Q5W0B7 351 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 B3GLCTQ6Y288 498 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 SLC30A7Q8NEW0 376 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 SLC26A10Q8NG04 563 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 C11orf40Q8WZ69 217 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 OTULINQ96BN8 352 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF75AQ96N20 296 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 CDADC1Q9BWV3 514 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 NMNAT2Q9BZQ4 307 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 OR2H1Q9GZK4 316 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 C8orf4Q9NR00 106 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF701Q9NV72 531 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-205ENST00000536255 TVP23BQ9NYZ1 205 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 ATP23Q9Y6H3 246 aa11.73□□□□□ -0.53
RPAIN-205ENST00000536255 DSCAMO60469 2012 aa11.72□□□□□ -0.53
RPAIN-205ENST00000536255 ZAR1LA6NP61 321 aa11.72□□□□□ -0.53
RPAIN-205ENST00000536255 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
RPAIN-205ENST00000536255 ATP6V1G2-DDX39BF2Z307 99 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms