RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PRR34Q9NV39 138 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SOHLH2Q9NX45 425 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CLEC5AQ9NY25 188 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLCO1C1Q9NYB5 712 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 HAO2Q9NYQ3 351 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SPG21Q9NZD8 308 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SMPXQ9UHP9 88 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 LEF1Q9UJU2 399 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 DKKL1Q9UK85 242 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MRTO4Q9UKD2 239 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 FBXL3Q9UKT7 428 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 IKZF3Q9UKT9 509 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLC7A11Q9UPY5 501 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLC35A3Q9Y2D2 325 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZFP30Q9Y2G7 519 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TMED3Q9Y3Q3 217 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TOGARAM1Q9Y4F4 1720 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TEX264Q9Y6I9 313 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CLCA3PQ9Y6N3 262 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 V9GYS6 101 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLIT1O75093 1534 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 LTN1O94822 1766 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 RGPD2P0DJD1 1756 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 PRRC2AP48634 2157 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 DDX60LQ5H9U9 1706 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZSWIM8A7E2V4 1837 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 A0A087WV62 115 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TRBV11-1A0A0K0K1C0 115 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 A0A0U1RQK1 487 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 A0A1B0GV72 72 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TMEM269A0A1B0GVZ9 245 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF320A2RRD8 509 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 FAM159BA6NKW6 160 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 GJE1A6NN92 205 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF716A6NP11 495 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF670-ZNF695F2Z2N8 137 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 F5H0A9 414 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 GPR31O00270 319 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 CDIPTO14735 213 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 CASKO14936 926 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ARPC2O15144 300 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 INPP4BO15327 924 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RNF13O43567 381 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TCF21O43680 179 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SRPX2O60687 465 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 GALR3O60755 368 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC19A2O60779 497 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SCN2BO60939 215 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SH3BGRLO75368 114 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 OR2J2O76002 312 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 OR2A4O95047 310 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC25A27O95847 323 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 GCGP01275 180 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 C1QAP02745 245 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 HIST1H2ABP04908 130 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ERCC1P07992 297 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC35G4P0C7Q5 338 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF735P0CB33 412 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PRSS56P0CW18 603 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ACP5P13686 325 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 HLA-GP17693 338 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 IL1RNP18510 177 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 CXCL2P19875 107 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RAB5AP20339 215 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 IL11P20809 199 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC2A5P22732 501 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 MPZP25189 248 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 HTR2CP28335 458 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 HTR1EP28566 365 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PTPN6P29350 595 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 GNRHRP30968 328 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RPL22P35268 128 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 PNPLA4P41247 253 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ELK3P41970 407 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PTGER3P43115 390 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RABIFP47224 123 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 OR3A1P47881 315 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 GABRA4P48169 554 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RGS4P49798 205 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 METAP1P53582 386 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 FGF8P55075 233 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 TMEM33P57088 247 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TAS2R39P59534 338 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TPI1P60174 286 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RAB8AP61006 207 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RPS8P62241 208 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 CSNK1G2P78368 415 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RPL19P84098 196 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 CDK6Q00534 326 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF616Q08AN1 781 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC10A7Q0GE19 358 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PLA2G7Q13093 441 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RUNX2Q13950 521 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 MAD2L1BPQ15013 274 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 JOSD1Q15040 202 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 ARL6IP1Q15041 203 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC9A3R2Q15599 337 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 RAB11BQ15907 218 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TAF9Q16594 264 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 AGKQ53H12 422 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms