RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 H2BFSP57053 126 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SLC26A5P58743 744 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 MFGE8Q08431 387 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 AANATQ16613 207 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 NHLRC1Q6VVB1 395 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 MISPQ8IVT2 679 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 MUC20Q8N307 709 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 PLPP5Q8NEB5 264 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 OR2AK2Q8NG84 335 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 OR6M1Q8NGM8 313 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SEH1LQ96EE3 360 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 PCED1AQ9H1Q7 454 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SLCO5A1Q9H2Y9 848 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SCPEP1Q9HB40 452 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 HHLA2Q9UM44 414 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 R4GMQ9 66 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 A0A0A6YYH2 397 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 A0A1B0GX78 115 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 A6NIZ1 184 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 A6NJ64 397 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SOX1O00570 391 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 NUDT21O43809 227 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 LPLP06858 475 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 S100A11P31949 105 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 NXPH1P58417 271 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 TAS2R19P59542 299 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 RAP1BP61224 184 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 RAP1AP62834 184 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 CFHR1Q03591 330 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 ZP4Q12836 540 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 OR5M1Q8NGP8 315 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 SLC25A44Q96H78 314 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 UPB1Q9UBR1 384 aa14.39□□□□□ -0.11
CHMP1A-202ENST00000535997 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 B8ZZF3 427 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 SRSF10O75494 262 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF823P16415 610 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 GMFBP60983 142 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 TDGQ13569 410 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MFSD13AQ14CX5 517 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 PCK2Q16822 640 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 CDH26Q8IXH8 852 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 GABRG1Q8N1C3 465 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM229BQ8NBD8 167 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 PCNPQ8WW12 178 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 WDR89Q96FK6 387 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 SLC25A21Q9BQT8 299 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 POTEKPQ9BYX7 375 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 NARFLQ9H6Q4 476 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 APMAPQ9HDC9 416 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MRPS18BQ9Y676 258 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MS4A18H0YCH9 400 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 DUX1O43812 170 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 HRGP04196 525 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 ITGB2P05107 769 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 SRFP11831 508 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 GABRA1P14867 456 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF250P15622 560 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 PTGS2P35354 604 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 ARRB1P49407 418 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MELKQ14680 651 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MS4A18Q3C1V0 323 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 B3GNTL1Q67FW5 361 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 DNM1P34Q6PK57 102 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 DEGS2Q6QHC5 323 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF704Q6ZNC4 412 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MDGA2Q7Z553 956 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 SLC26A10Q8NG04 563 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 OR8S1Q8NH09 359 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 LRRC20Q8TCA0 184 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 TNFAIP8L1Q8WVP5 186 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 PTX4Q96A99 478 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 KCNK15Q9H427 330 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 EXO5Q9H790 373 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 TAS2R4Q9NYW5 299 aa14.38□□□□□ -0.11
CHMP1A-202ENST00000535997 MEIS3P1A6NDR6 274 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 F5H5P2 479 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 ADAM10O14672 748 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 MPZL1O95297 269 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 RNF4P78317 190 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 HLXQ14774 488 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 C2orf68Q2NKX9 166 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 C1orf189Q5VU69 101 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 CCDC107Q8WV48 283 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 ST8SIA1Q92185 356 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 C1orf198Q9H425 327 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 RDH8Q9NYR8 311 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 KCNN3Q9UGI6 736 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF107Q9UII5 783 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 EMC9Q9Y3B6 208 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 LAMA1P25391 3075 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 CPAMD8Q8IZJ3 1885 aa14.37□□□□□ -0.11
CHMP1A-202ENST00000535997 NPIPB13A6NJU9 1138 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 NPIPB4C9JG80 1138 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 ARPC5O15511 151 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 PIAS2O75928 621 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 AQP8O94778 261 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms