RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 SNX29P2Q8IUI4 249 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 DND1Q8IYX4 353 aaKnown RBP7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 RDH10Q8IZV5 341 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 CLIP4Q8N3C7 705 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 MS4A15Q8N5U1 240 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 LSMEM1Q8N8F7 131 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 COX18Q8N8Q8 333 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 TMEM239Q8WW34 195 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 PHYHIPQ92561 330 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 CDS1Q92903 461 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 HGDQ93099 445 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 S100PBPQ96BU1 408 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 RBM18Q96H35 190 aaKnown RBP7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 DIRAS2Q96HU8 199 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 SOSTQ9BQB4 213 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 PELOQ9BRX2 385 aaKnown RBP7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 KATNB1Q9BVA0 655 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 PRR14Q9BWN1 585 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 CACNG6Q9BXT2 260 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 NXF5Q9H1B4 397 aaKnown RBP7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 RNF167Q9H6Y7 350 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 RNF122Q9H9V4 155 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 FOLH1BQ9HBA9 442 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 EQTNQ9NQ60 294 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 POLE4Q9NR33 117 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 CMC2Q9NRP2 79 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 ZNF221Q9UK13 617 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 TBC1D24Q9ULP9 559 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 SLC35A3Q9Y2D2 325 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 MED31Q9Y3C7 131 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 CHST2Q9Y4C5 530 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 KCNE3Q9Y6H6 103 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
SHARPIN-210ENST00000534435 FAM172BPA6NC97 362 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 DPRXA6NFQ7 191 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 BHLHE40O14503 412 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 RGS13O14921 159 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 CHP2O43745 196 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 IDH3BO43837 385 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ZIC3O60481 467 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 PPM1BO75688 479 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 MT-ND5P03915 603 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 CD3EP07766 207 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 USF1P22415 310 aaPredicted RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 S100A1P23297 94 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 HLA-DMAP28067 261 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ABCD3P28288 659 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 GALNSP34059 522 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 CLDN20P56880 219 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 RAB25P57735 213 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ACTG1P63261 375 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 LSM11P83369 360 aaKnown RBP eCLIP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 BSPH1Q075Z2 132 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 GALEQ14376 348 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 OR1Q1Q15612 314 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 KCNJ8Q15842 424 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ZNF79Q15937 498 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 PRICKLE4Q2TBC4 344 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 EEF1A1P5Q5VTE0 462 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 TRIQKQ629K1 86 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 OR2A2Q6IF42 318 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SLC30A6Q6NXT4 461 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 NIPAL3Q6P499 406 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 FAM111BQ6SJ93 734 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SMARCD3Q6STE5 483 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SEZ6L2Q6UXD5 910 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 NKAIN4Q8IVV8 208 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 LAX1Q8IWV1 398 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ZNF440Q8IYI8 595 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 POMGNT2Q8NAT1 580 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 C19orf18Q8NEA5 215 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 DUSP18Q8NEJ0 188 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SEMA6DQ8NFY4 1073 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 OR4Q3Q8NH05 313 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 FANK1Q8TC84 345 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 GPR151Q8TDV0 419 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 C10orf105Q8TEF2 133 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 GATAD2BQ8WXI9 593 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 KAT2AQ92830 837 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ADIPOR1Q96A54 375 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 CMTM3Q96MX0 182 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 LMF2Q9BU23 707 aaKnown RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ZNF426Q9BUY5 554 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SLC19A3Q9BZV2 496 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 HOXD1Q9GZZ0 328 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 OR52D1Q9H346 318 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 BARX1Q9HBU1 254 aaPredicted RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ABCB9Q9NP78 766 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 KLRF1Q9NZS2 232 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 SLC7A7Q9UM01 511 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 GPR55Q9Y2T6 319 aaPredicted RBP7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 NOX1Q9Y5S8 564 aa7.39□□□□□ -1.23
SHARPIN-210ENST00000534435 IGHV4-61A0A0C4DH41 118 aa7.38□□□□□ -1.23
SHARPIN-210ENST00000534435 A0A1W2PQ09 198 aa7.38□□□□□ -1.23
SHARPIN-210ENST00000534435 SYNDIG1LA6NDD5 238 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms