RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MUC20Q8N307 709 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 COX18Q8N8Q8 333 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZSCAN4Q8NAM6 433 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 OR9K2Q8NGE7 335 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PIGXQ8TBF5 258 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ST7LQ8TDW4 575 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RAB1CQ92928 201 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RAB39BQ96DA2 213 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 LRRC39Q96DD0 335 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC47A1Q96FL8 570 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CHMP6Q96FZ7 201 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF75AQ96N20 296 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RAB3IPQ96QF0 476 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TBX15Q96SF7 602 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR22Q99680 433 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RBBP8Q99708 897 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ACPTQ9BZG2 426 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 YIPF3Q9GZM5 350 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM234AQ9H0X4 552 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 YY1AP1Q9H869 796 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 C3orf14Q9HBI5 128 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 NMRAL1Q9HBL8 299 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SEPSECSQ9HD40 501 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SERINC1Q9NRX5 453 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 DECR2Q9NUI1 292 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ACER3Q9NUN7 267 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GIMAP4Q9NUV9 329 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 B3GNT2Q9NY97 397 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 VPS29Q9UBQ0 182 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GRHPRQ9UBQ7 328 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TBK1Q9UHD2 729 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PCTPQ9UKL6 214 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RCE1Q9Y256 329 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 POLR3HQ9Y535 204 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TIMM22Q9Y584 194 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 U3KQK5 164 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 DYNC1H1Q14204 4646 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PPIAL4EA0A075B759 164 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PPIAL4CA0A0B4J2A2 164 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV3-64DA0A0J9YX35 117 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A0U1RQK1 487 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A1W2PRD5 423 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A1W2PRF3 423 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A1W2PRM7 423 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 RBMY1BA6NDE4 496 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 RBMY1EA6NEQ0 496 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CLDN25C9JDP6 229 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF587BE7ETH6 402 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PPIAL4DF5H284 164 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NPIPB9F8W1W9 429 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 M0R3G1 203 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 AP3D1O14617 1153 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF264O43296 627 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 DNPH1O43598 174 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 EIF4E2O60573 245 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 UGDHO60701 494 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SCN2BO60939 215 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ACTL6BO94805 426 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PMS2P2O95744 297 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM107AO95990 144 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV1-46P01743 117 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C1QCP02747 245 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C2P06681 752 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 RBMY1DP0C7P1 496 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PPIAL4FP0DN26 164 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CD28P10747 220 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 UBL4AP11441 157 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PSG1P11464 419 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NQO1P15559 274 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PAX7P23759 505 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 FPR3P25089 353 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ARR3P36575 388 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 APOBEC1P41238 236 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 IER3P46695 156 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 IDH2P48735 452 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 P2RY4P51582 365 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ATP12AP54707 1039 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 DLX1P56177 255 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CLDN17P56750 224 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 FGF12P61328 243 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SUMO2P61956 95 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 GNB2P62879 340 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC35A1P78382 337 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ELF3P78545 371 aaPredicted RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 POU3F1Q03052 451 aaPredicted RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 LCP2Q13094 533 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CBFBQ13951 182 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 LASP1Q14847 261 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 HEPACAMQ14CZ8 416 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 HERPUD1Q15011 391 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZMYND11Q15326 602 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 OR7A5Q15622 319 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR68Q15743 365 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CEACAM16Q2WEN9 425 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 HFEQ30201 348 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM201AQ5SY85 155 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SPATA46Q5T0L3 261 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 HHATQ5VTY9 493 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PRAMEF8Q5VWM4 474 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms