RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PPP1R14AQ96A00 147 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 NEIL1Q96FI4 390 aaPredicted RBP10.18□□□□□ -0.78
SVIP-205ENST00000533774 EPYCQ99645 322 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 RHOXF2Q9BQY4 288 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 MRPL13Q9BYD1 178 aaKnown RBP10.18□□□□□ -0.78
SVIP-205ENST00000533774 TOR3AQ9H497 397 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 TPT1P8Q9HAU6 139 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 BCL2L10Q9HD36 194 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 NECAP2Q9NVZ3 263 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 EIF3KQ9UBQ5 218 aaKnown RBP10.18□□□□□ -0.78
SVIP-205ENST00000533774 MIOXQ9UGB7 285 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 IL19Q9UHD0 177 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 H3BSA7 217 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 RFXANKO14593 260 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 TSPAN9O75954 239 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 SLC2A10O95528 541 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 FUT4P22083 530 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 PMELP40967 661 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 PITPNBP48739 271 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 GDI2P50395 445 aaKnown RBP10.17□□□□□ -0.78
SVIP-205ENST00000533774 ZNF133P52736 654 aaPredicted RBP10.17□□□□□ -0.78
SVIP-205ENST00000533774 ERVK-25P63136 954 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 HOXA4Q00056 320 aaPredicted RBP10.17□□□□□ -0.78
SVIP-205ENST00000533774 PDCD4Q53EL6 469 aaKnown RBP10.17□□□□□ -0.78
SVIP-205ENST00000533774 ZMAT1Q5H9K5 638 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 WDR25Q64LD2 544 aaPredicted RBP10.17□□□□□ -0.78
SVIP-205ENST00000533774 LINC00114Q6XXX2 140 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 LDLRAD3Q86YD5 345 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 C11orf44Q8N8P7 122 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 TCP10LQ8TDR4 215 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 ZNF607Q96SK3 696 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 SEPHS2Q99611 448 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 TMEM43Q9BTV4 400 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 SLC19A3Q9BZV2 496 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 A4GALTQ9NPC4 353 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 ACOXLQ9NUZ1 547 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 AIG1Q9NVV5 245 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 SIGLEC9Q9Y336 463 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 SACSQ9NZJ4 4579 aa10.17□□□□□ -0.78
SVIP-205ENST00000533774 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 IGHV3-64DA0A0J9YX35 117 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 RNF13O43567 381 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 CH25HO95992 272 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 MT-ATP6P00846 226 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 BPGMP07738 259 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 LBPP18428 481 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 TNFSF4P23510 183 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 PRKAR1BP31321 381 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 CLRN1P58418 232 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 MRPS34P82930 218 aaKnown RBP10.16□□□□□ -0.78
SVIP-205ENST00000533774 ZNF74Q16587 644 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 WHAMMP3Q1A5X7 153 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 ZNF404Q494X3 552 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 C10orf128Q5T292 105 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 C10orf111Q8N326 155 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 C19orf18Q8NEA5 215 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 NOXO1Q8NFA2 376 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 SGCDQ92629 289 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 PHF21AQ96BD5 680 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 NMD3Q96D46 503 aaKnown RBP10.16□□□□□ -0.78
SVIP-205ENST00000533774 PLEKHA8Q96JA3 519 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 NUF2Q9BZD4 464 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 SEMA6AQ9H2E6 1030 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 SIAEQ9HAT2 523 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 CCNB1IP1Q9NPC3 277 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 FOXJ3Q9UPW0 622 aa10.16□□□□□ -0.78
SVIP-205ENST00000533774 ZNF879B4DU55 563 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 K7EIL1 84 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 P2RY10O00398 339 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 ST8SIA5O15466 376 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 TRMUO75648 421 aaKnown RBP10.15□□□□□ -0.78
SVIP-205ENST00000533774 LYPD3O95274 346 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 MPIG6BO95866 241 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 IGHG1P01857 330 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 THY1P04216 161 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 ZCCHC18P0CG32 403 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 KITLGP21583 273 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 CPT2P23786 658 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 SLC6A2P23975 617 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 ZNF84P51523 738 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 FMODQ06828 376 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 BST1Q10588 318 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 HERPUD1Q15011 391 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 SGCAQ16586 387 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 TTMPQ5BVD1 217 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 CEP85LQ5SZL2 805 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 SLC35E4Q6ICL7 350 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 DHRS4L2Q6PKH6 230 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 GDPGP1Q6ZNW5 385 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 LYG1Q8N1E2 194 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 OR8B3Q8NGG8 313 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 BBS10Q8TAM1 723 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 GATAD2BQ8WXI9 593 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 C4orf45Q96LM5 186 aa10.15□□□□□ -0.78
SVIP-205ENST00000533774 OR8B2Q96RD0 313 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms