RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RIDAP52758 137 aaKnown RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 SLC37A1P57057 533 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 RPL27P61353 136 aaKnown RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 TFF2Q03403 129 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 BIKQ13323 160 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 ZNF169Q14929 603 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 KCTD18Q6PI47 426 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 BPIFB2Q8N4F0 458 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 METTL21AQ8WXB1 218 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 PTX4Q96A99 478 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 ZNF285Q96NJ3 590 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 NXF5Q9H1B4 397 aaKnown RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 SLC2A8Q9NY64 477 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MSRAQ9UJ68 235 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MEGF11A6BM72 1044 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 ABCD4O14678 606 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 RAD1O60671 282 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MT-ATP6P00846 226 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 SPARCP09486 303 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MPZP25189 248 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 INSM1Q01101 510 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 ZNF117Q03924 483 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 PMPCAQ10713 525 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 SGCBQ16585 318 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 GLYATL3Q5SZD4 288 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 PHF19Q5T6S3 580 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MAMDC2Q7Z304 686 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 CLRN3Q8NCR9 226 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 PMEPA1Q969W9 287 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 PPP1R14AQ96A00 147 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 SLC46A1Q96NT5 459 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 GAS2L1Q99501 681 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 KLK13Q9UKR3 277 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 GTF2A1LQ9UNN4 478 aa14.95□□□□□ -0.02
CTSB-228ENST00000533455 MRPS18BQ9Y676 258 aaKnown RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 COL5A1P20908 1838 aaPredicted RBP14.95□□□□□ -0.02
CTSB-228ENST00000533455 CHD9Q3L8U1 2897 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 RNF222A6NCQ9 220 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 FRG2CA6NGY1 282 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 C10orf142B7Z368 130 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 NUDT21O43809 227 aaKnown RBP14.94□□□□□ -0.02
CTSB-228ENST00000533455 SRSF10O75494 262 aaKnown RBP14.94□□□□□ -0.02
CTSB-228ENST00000533455 OR6A2O95222 327 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 CNR1P21554 472 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 CXCR1P25024 350 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 STARP49675 285 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 MEF2DQ14814 521 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 ACKR1Q16570 336 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 VWA2Q5GFL6 755 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 FAM74A1Q5RGS3 127 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 C1orf100Q5SVJ3 147 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 LIN54Q6MZP7 749 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 OR5T2Q8NGG2 359 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 OR10Z1Q8NGY1 313 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 LRRC46Q96FV0 321 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 VRK1Q99986 396 aaPredicted RBP14.94□□□□□ -0.02
CTSB-228ENST00000533455 TMEM185BQ9H7F4 350 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 COMMD9Q9P000 198 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 FBXO4Q9UKT5 387 aa14.94□□□□□ -0.02
CTSB-228ENST00000533455 LOC390937A0A1W2PQ73 354 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 DISC1C4P0D8 188 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 C11orf98E9PRG8 122 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 IL2RAP01589 272 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 IGHMP01871 453 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 RAB3AP20336 220 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 ZBTB25P24278 435 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 LUMP51884 338 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 TMEM31Q5JXX7 168 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 FAM160A2Q8N612 972 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 ZNF321PQ8N8H1 164 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 FAM174AQ8TBP5 190 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 PTPMT1Q8WUK0 201 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 MMABQ96EY8 250 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 SLC25A44Q96H78 314 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 NKX3-1Q99801 234 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 SLC6A7Q99884 636 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 PTDSS2Q9BVG9 487 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 ZNF416Q9BWM5 594 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 TAS2R3Q9NYW6 316 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 CGGBP1Q9UFW8 167 aaPredicted RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 MRTO4Q9UKD2 239 aaKnown RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 NOP16Q9Y3C1 178 aaKnown RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 LRP12Q9Y561 859 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 KIF26BQ2KJY2 2108 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 SLC16A7O60669 478 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 GP1BAP07359 652 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 RAB6AP20340 208 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 GABRA4P48169 554 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 EIF2B1Q14232 305 aaKnown RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 C1QL3Q5VWW1 255 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 OTPQ5XKR4 325 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 PAPD4Q6PIY7 484 aaKnown RBP14.93□□□□□ -0.02
CTSB-228ENST00000533455 UQCC3Q6UW78 93 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 OR2W3Q7Z3T1 314 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 LYG2Q86SG7 212 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 SLC25A42Q86VD7 318 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 LYPD6Q86Y78 171 aa14.93□□□□□ -0.02
CTSB-228ENST00000533455 CCDC36Q8IYA8 594 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms