RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RAP1BP61224 184 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SEC61A1P61619 476 aaKnown RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 RAP1AP62834 184 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 NKAIN1Q4KMZ8 207 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 C8orf82Q6P1X6 216 aaPredicted RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 C16orf47Q6ZP98 133 aaPredicted RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 NLRP8Q86W28 1048 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 TGIF2LXQ8IUE1 241 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 GAREM1Q9H706 876 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 KLHL13Q9P2N7 655 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 RPH3ALQ9UNE2 315 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 SIT1Q9Y3P8 196 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 FOCADQ5VW36 1801 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 IDSB3KWA1 339 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 H7C417 338 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SIGLEC5O15389 551 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 IFNGR1P15260 489 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SPI1P17947 270 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 COL9A1P20849 921 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 PTBP1P26599 531 aaKnown RBP eCLIP11.16□□□□□ -0.62
BDNF-218ENST00000533246 CD27P26842 260 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 TFF2Q03403 129 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SIGLEC14Q08ET2 396 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SLC36A2Q495M3 483 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 MEX3BQ6ZN04 569 aaKnown RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 DCXRQ7Z4W1 244 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 GLB1L2Q8IW92 636 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 KLHDC8BQ8IXV7 354 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 KIAA1143Q96AT1 154 aaPredicted RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 WDR76Q9H967 626 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 ZFP57Q9NU63 452 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 BDP1A6H8Y1 2624 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 AGAP14A8MT82 685 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 SURF4O15260 269 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 TGOLN2O43493 480 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 EIF1BO60739 113 aaKnown RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 CSF3P09919 207 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 EIF1P41567 113 aaKnown RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 ETFBKMTQ8IXQ9 262 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 GTPBP8Q8N3Z3 284 aaPredicted RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 SIRT6Q8N6T7 355 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 OR4D11Q8NGI4 311 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 OR52I2Q8NH67 350 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 TERB2Q8NHR7 220 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 STT3BQ8TCJ2 826 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 ZBTB8AQ96BR9 441 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 PTTG3PQ9NZH4 202 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
BDNF-218ENST00000533246 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 HS3ST3A1Q9Y663 406 aa11.16□□□□□ -0.62
BDNF-218ENST00000533246 TRBV5-3A0A0A0MS03 114 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SOX15O60248 233 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 MOSPD3O75425 235 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 IGHG1P01857 330 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SNRNP70P08621 437 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 MSX1P28360 303 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 S100A7P31151 101 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 FASLGP48023 281 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 ACKR1Q16570 336 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 C1orf140Q5VVS0 124 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 VN1R4Q7Z5H5 301 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 DCUN1D4Q92564 292 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 HLA-CQ95604 372 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 FBXO17Q96EF6 278 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 FAM60AQ9NP50 221 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 A3GALT2U3KPV4 340 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 A0A1B0GTQ1 180 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 FFAR1O14842 300 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 THBS1P07996 1170 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 CPEP16870 476 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 ANXA7P20073 488 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 C21orf58P58505 322 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 MPEG1Q2M385 716 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SLC25A35Q3KQZ1 300 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 C14orf28Q4W4Y0 310 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 FAM69AQ5T7M9 428 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PIGCQ92535 297 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 STACQ99469 402 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PCDHGA1Q9Y5H4 931 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PTPRFP10586 1907 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 TRAV36DV7A0A075B6V5 113 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 HSPB6O14558 160 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SLC31A2O15432 143 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SNRNP200O75643 2136 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 GLCEO94923 617 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms