RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 OR13C2Q8NGS9 318 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 FGFBP3Q8TAT2 258 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 SORCS2Q96PQ0 1159 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 RBP7Q96R05 134 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 TNFRSF13CQ96RJ3 184 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 RAB1BQ9H0U4 201 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 RNF121Q9H920 327 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 SIAEQ9HAT2 523 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 MYOZ1Q9NP98 299 aaPredicted RBP14.38□□□□□ -0.11
PKP3-209ENST00000533069 PAPOLBQ9NRJ5 636 aaKnown RBP14.38□□□□□ -0.11
PKP3-209ENST00000533069 ZNF346Q9UL40 294 aaKnown RBP14.38□□□□□ -0.11
PKP3-209ENST00000533069 ZANQ9Y493 2812 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 SLC22A23A1A5C7 686 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 NDUFS8O00217 210 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 CDC42EP2O14613 210 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 SLC2A10O95528 541 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 TP53P04637 393 aaPredicted RBP14.37□□□□□ -0.11
PKP3-209ENST00000533069 PATE4P0C8F1 98 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 GPR4P46093 362 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 OMPP47874 163 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 EVX1P49640 407 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 ESRRGP62508 458 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 PLP2Q04941 152 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 SEC23BQ15437 767 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 ZBED5Q49AG3 693 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 IGFN1Q86VF2 1251 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 MEX3DQ86XN8 651 aaKnown RBP14.37□□□□□ -0.11
PKP3-209ENST00000533069 ZNF584Q8IVC4 421 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 CLDN22Q8N7P3 220 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 MAPK1IP1LQ8NDC0 245 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 SLC30A7Q8NEW0 376 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 ZNF519Q8TB69 540 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 C10orf105Q8TEF2 133 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 MRPL24Q96A35 216 aaKnown RBP14.37□□□□□ -0.11
PKP3-209ENST00000533069 TSPAN32Q96QS1 320 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 ZNF184Q99676 751 aaPredicted RBP14.37□□□□□ -0.11
PKP3-209ENST00000533069 DOK1Q99704 481 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 VRK1Q99986 396 aaPredicted RBP14.37□□□□□ -0.11
PKP3-209ENST00000533069 KCNN2Q9H2S1 579 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 Q9H521 79 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 UGT2A1Q9Y4X1 527 aa14.37□□□□□ -0.11
PKP3-209ENST00000533069 SNAP29O95721 258 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 GASTP01350 101 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 CD14P08571 375 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 RPL4P36578 427 aaKnown RBP14.36□□□□□ -0.11
PKP3-209ENST00000533069 GSSP48637 474 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 PDLIM4P50479 330 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 DAPP51397 102 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 FMODQ06828 376 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 KRTAP1-1Q07627 177 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 PPP1R8Q12972 351 aaKnown RBP14.36□□□□□ -0.11
PKP3-209ENST00000533069 SLC25A47Q6Q0C1 308 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 ZER1Q7Z7L7 766 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 ARIH2OSQ8N7S6 290 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 OR9Q2Q8NGE9 314 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 OR1J2Q8NGS2 313 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 NSMAFQ92636 917 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 FAM46AQ96IP4 442 aaKnown RBP14.36□□□□□ -0.11
PKP3-209ENST00000533069 SLC29A1Q99808 456 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 GRHPRQ9UBQ7 328 aa14.36□□□□□ -0.11
PKP3-209ENST00000533069 IQCMA0A1B0GVH7 501 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 H0YAE9 185 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 XKRYO14609 159 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 AHCYL1O43865 530 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 MMP7P09237 267 aaPredicted RBP14.35□□□□□ -0.11
PKP3-209ENST00000533069 OSMP13725 252 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 PRKACGP22612 351 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 GUCA1AP43080 201 aaPredicted RBP14.35□□□□□ -0.11
PKP3-209ENST00000533069 LOXL1Q08397 574 aaPredicted RBP14.35□□□□□ -0.11
PKP3-209ENST00000533069 TBC1D28Q2M2D7 210 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 TTC23Q5W5X9 447 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 RASSF6Q6ZTQ3 369 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 HS3ST5Q8IZT8 346 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 GALNT4Q8N4A0 578 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 ZNF555Q8NEP9 628 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 NEU4Q8WWR8 484 aaPredicted RBP14.35□□□□□ -0.11
PKP3-209ENST00000533069 NABP1Q96AH0 204 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 TEX12Q9BXU0 123 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 GABARAPL3Q9BY60 117 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 CDH20Q9HBT6 801 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 CCNB1IP1Q9NPC3 277 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
PKP3-209ENST00000533069 A0A096LNT2 108 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 IGKV1D-43A0A0B4J1Z2 117 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 LOC390937A0A1W2PQ73 354 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 TMEM129A0AVI4 362 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 SYNGR3O43761 229 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 GPRIN2O60269 458 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 LY6HO94772 140 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 NDUFB2O95178 105 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 CDAP32320 146 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 ERVK-25P63136 954 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 HSF2Q03933 536 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 FAM27BQ5VT28 67 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 GPR139Q6DWJ6 353 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 FOXL2NBQ6ZUU3 175 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 LRRC18Q8N456 261 aa14.34□□□□□ -0.11
PKP3-209ENST00000533069 GPX7Q96SL4 187 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms