RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 TNFSF4P23510 183 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 GATA3P23771 443 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 CFPP27918 469 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 CDAP32320 146 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 OR1E2P47887 323 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 LIMS1P48059 325 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 LMO4P61968 165 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 PPP1CBP62140 327 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 RUNX1T1Q06455 604 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 FMODQ06828 376 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 RABL3Q5HYI8 236 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 SPATA46Q5T0L3 261 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 THEM4Q5T1C6 240 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 RBMS3Q6XE24 437 aaKnown RBP8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 ZNF771Q7L3S4 317 aaPredicted RBP8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 RRM2BQ7LG56 351 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 HDXQ7Z353 690 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 NKAIN4Q8IVV8 208 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 AKR7LQ8NHP1 331 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 MOSPD2Q8NHP6 518 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 SLC25A40Q8TBP6 338 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 IPCEF1Q8WWN9 437 aaPredicted RBP8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 LRRC58Q96CX6 371 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 PRRC1Q96M27 445 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 ALG12Q9BV10 488 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 TXNIPQ9H3M7 391 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 C7orf69Q9H7B7 122 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 C20orf141Q9NUB4 165 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 GID8Q9NWU2 228 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 ZDHHC8Q9ULC8 765 aa8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 NDRG4Q9ULP0 352 aaKnown RBP8.2□□□□□ -1.1
PPFIA1-223ENST00000532793 A6NIZ1 184 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 C12orf71A8MTZ7 269 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FAM220BPB1ANY3 271 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 H3BSA7 217 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 XKRYO14609 159 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 TIMM8AO60220 97 aaPredicted RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FOXH1O75593 365 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 ABHD16AO95870 558 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 IGHV2-5P01817 119 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 TNFRSF1AP19438 455 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 MSR1P21757 451 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FPR2P25090 351 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 RPL4P36578 427 aaKnown RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 ZNF133P52736 654 aaPredicted RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 HILS1P60008 231 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 CTXN1P60606 82 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 RAP1BP61224 184 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 RPL27P61353 136 aaKnown RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 RAP1AP62834 184 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 PSG4Q00888 419 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 ANKDD1AQ495B1 522 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 CYBRD1Q53TN4 286 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 COQ5Q5HYK3 327 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 ARMC4Q5T2S8 1044 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FAM27BQ5VT28 67 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 MBNL2Q5VZF2 373 aaKnown RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 USP43Q70EL4 1123 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 TSPYL5Q86VY4 417 aaPredicted RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 ZNF101Q8IZC7 436 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 NPEPL1Q8NDH3 523 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 SEMA6DQ8NFY4 1073 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 OR2T12Q8NG77 320 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 KLF14Q8TD94 323 aaPredicted RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FAM216AQ8WUB2 273 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 LIPHQ8WWY8 451 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 HDAC2Q92769 488 aaKnown RBP8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 BPIFA2Q96DR5 249 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 POM121L2Q96KW2 1035 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 SEPHS2Q99611 448 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 FNDC11Q9BVV2 318 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 TMEM120AQ9BXJ8 343 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 OR2J1Q9GZK6 312 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 HIF3AQ9Y2N7 669 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 TIMM10BQ9Y5J6 103 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 MXRA5Q9NR99 2828 aa8.19□□□□□ -1.1
PPFIA1-223ENST00000532793 EFCAB9A8MZ26 197 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 FBP2O00757 339 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 PIP5K1CO60331 668 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 IFNW1P05000 195 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 CST2P09228 141 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 MAKP20794 623 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 LAP3P28838 519 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 GZMMP51124 257 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 ARFIP2P53365 341 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 SELENOWP63302 87 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 TNFAIP6P98066 277 aaPredicted RBP8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 SCRN3Q0VDG4 424 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 TRAM2Q15035 370 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 ARMCX4Q5H9R4 360 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 MTX3Q5HYI7 312 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 ARPINQ7Z6K5 226 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 OAFQ86UD1 273 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 MICU2Q8IYU8 434 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 KLHL36Q8N4N3 616 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 SPICQ8N5J4 248 aa8.18□□□□□ -1.1
PPFIA1-223ENST00000532793 OR51A7Q8NH64 312 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms