RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PTTG3PQ9NZH4 202 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 SSX4O60224 188 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 PAPLNO95428 1278 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 TBXA2RP21731 343 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF628Q5EBL2 1059 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 ATPAF1Q5TC12 328 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 C1orf210Q8IVY1 113 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 TTC9Q92623 222 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 PLEKHF2Q9H8W4 249 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 C1orf196B1AJZ1 125 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 FZD6O60353 706 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 HNF4GQ14541 408 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 TMEM185AQ8NFB2 350 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 C1QTNF3Q9BXJ4 246 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 STMND1H3BQB6 276 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 CLDN1O95832 211 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 CTXN2P0C2S0 81 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DEFA4P12838 97 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 RBP2P50120 134 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 THEM4Q5T1C6 240 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DLEU7Q6UYE1 221 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 RBMS3Q6XE24 437 aaKnown RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 TRILQ7L0X0 811 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 COMMD7Q86VX2 200 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 FAM3DQ96BQ1 224 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 NAA50Q9GZZ1 169 aaKnown RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 PRICKLE3O43900 615 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 RAB13P51153 203 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DUSP2Q05923 314 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DUSP8Q13202 625 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC35G3Q8N808 338 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 OR52I1Q8NGK6 324 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 HES7Q9BYE0 225 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 SLA2Q9H6Q3 261 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 EMC7Q9NPA0 242 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 POMT2Q9UKY4 750 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 PPM1DO15297 605 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 CISD3P0C7P0 127 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 BSGP35613 385 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 GLYATL3Q5SZD4 288 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 AGPAT2O15120 278 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 CNIH1O95406 144 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 MMP11P24347 488 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 GDNFP39905 211 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 C9orf152Q5JTZ5 239 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SLAMF9Q96A28 289 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 CTSFQ9UBX1 484 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 B3GALT5Q9Y2C3 310 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC2A10O95528 541 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 GLAP06280 429 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 QDPRP09417 244 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF674Q2M3X9 581 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 JAM3Q9BX67 310 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 F6UZH7 168 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 CALCBP10092 127 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SHEQ5VZ18 495 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A096LPE4 126 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A1W2PPZ6 126 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 MEIOCA2RUB1 952 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 CLN5O75503 358 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 HBE1P02100 147 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 MPLP40238 635 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 RAC1P63000 192 aa13.48□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A0D9SG52 128 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 LINC01387J3KSC0 135 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ADH4P08319 380 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SHC1P29353 583 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SUMO3P55854 103 aaPredicted RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 RPS27AP62979 156 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 UBA52P62987 128 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ADPRMQ3LIE5 342 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 NHSL2Q5HYW2 709 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 RFPL4BQ6ZWI9 263 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 GATA6Q92908 595 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC38A1Q9H2H9 487 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 EXO1Q9UQ84 846 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 CXCL13O43927 109 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 LY75O60449 1722 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 CBR3O75828 277 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 CORO6Q6QEF8 472 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 PARP16Q8N5Y8 322 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ST7LQ8TDW4 575 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms