RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VWA8A3KMH1 1905 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 OR1F1O43749 312 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 PLGP00747 810 aaPredicted RBP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 CST2P09228 141 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 ANKRD34CP0C6C1 535 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 BTF3P20290 206 aaKnown RBP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 ACRV1P26436 265 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 TLX1P31314 330 aaPredicted RBP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 TAS2R31P59538 309 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 SLBPQ14493 270 aaKnown RBP eCLIP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 MEF2DQ14814 521 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM41BQ5BJD5 291 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 COX20Q5RI15 118 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 PIP5KL1Q5T9C9 394 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 HMGN2P46Q86SG4 172 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 SYT9Q86SS6 491 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM18Q96B42 140 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 PRRC1Q96M27 445 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 ADAD1Q96M93 576 aaKnown RBP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 STARD5Q9NSY2 213 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 NEU3Q9UQ49 428 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 DTX4Q9Y2E6 619 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 FBXO7Q9Y3I1 522 aa6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 ARID1BQ8NFD5 2236 aaPredicted RBP6.21□□□□□ -1.42
TGFBR3-209ENST00000532540 UNC119BA6NIH7 251 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SOCS6O14544 535 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 KLK8O60259 260 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 GPRIN2O60269 458 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PTBP3O95758 552 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR4E1P0C645 316 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PSMB5P28074 263 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 AVPR2P30518 371 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CASRP41180 1078 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SSR2P43308 183 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 HABP2Q14520 560 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PPA1Q15181 289 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR7E24Q6IFN5 339 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TRAM1L1Q8N609 369 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR5T1Q8NG75 326 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 NEK7Q8TDX7 302 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CORO2AQ92828 525 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM38AQ9H6F2 299 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PTGES2Q9H7Z7 377 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 LRFN1Q9P244 771 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PRAMEF26H0Y7S4 382 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 RTCAO00442 366 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SRPX2O60687 465 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 AK1P00568 194 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 GAAP10253 952 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 HIST1H1BP16401 226 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 MPIP34949 423 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TAS2R20P59543 309 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 IKZF1Q13422 519 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR5I1Q13606 314 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 KLF9Q13886 244 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 EIF2B1Q14232 305 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 GUK1Q16774 197 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CCSMST1Q4G0I0 132 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 KIAA0895LQ68EN5 471 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SYT13Q7L8C5 426 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PPP1R3BQ86XI6 285 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 RCBTB1Q8NDN9 531 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ADPRHL1Q8NDY3 354 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR13C9Q8NGT0 318 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 DVL3Q92997 716 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 C14orf144Q96I85 54 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ATG101Q9BSB4 218 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC23A2Q9UGH3 650 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TP53TG5Q9Y2B4 290 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SPTBN5Q9NRC6 3674 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TRBV5-3A0A0A0MS03 114 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 TEX13DA0A0J9YY54 714 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 FEZF1A0PJY2 475 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ACOD1A6NK06 481 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ATF1P18846 271 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC6A6P31641 620 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SULT1A1P50225 295 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CARD18P57730 90 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ZP1P60852 638 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 HHEXQ03014 270 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 ARFRP1Q13795 201 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 RAB11BQ15907 218 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 FAM83HQ6ZRV2 1179 aaPredicted RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SHISA6Q6ZSJ9 500 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OVCH1Q7RTY7 1134 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CYB561A3Q8NBI2 242 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR9K2Q8NGE7 335 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR4C16Q8NGL9 310 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR4C15Q8NGM1 316 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 NUDCD2Q8WVJ2 157 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SECTM1Q8WVN6 248 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PHYHIPQ92561 330 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 OR14A2Q96R54 314 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 CNN2Q99439 309 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 DDA1Q9BW61 102 aa6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 PARP12Q9H0J9 701 aaKnown RBP6.2□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC2A4RGQ9NR83 387 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms