RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ACTA1P68133 377 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ST3GAL4Q11206 333 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 TWF1Q12792 350 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CALCOCO2Q13137 446 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ABRAXAS2Q15018 415 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 UAP1Q16222 522 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 TAL2Q16559 108 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF506Q5JVG8 444 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 Q6ZN92 141 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 HORMAD1Q86X24 394 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 TMEM25Q86YD3 366 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC7A5P1Q8MH63 180 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CA13Q8N1Q1 262 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 C4orf32Q8N8J7 132 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 OR10R2Q8NGX6 335 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 OR10Z1Q8NGY1 313 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 C11orf45Q8TAV5 145 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF564Q8TBZ8 553 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 AGAP11Q8TF27 550 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 PHF10Q8WUB8 498 aaKnown RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CPNE4Q96A23 557 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 FGGYQ96C11 551 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 LYZL4Q96KX0 146 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 RARRES2Q99969 163 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF426Q9BUY5 554 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 C20orf85Q9H1P6 137 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 NXF3Q9H4D5 531 aaKnown RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 WDR55Q9H6Y2 383 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 UBE2ZQ9H832 354 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 JPT2Q9H910 190 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ISG20L2Q9H9L3 353 aaKnown RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 PLCXD1Q9NUJ7 323 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CFL2Q9Y281 166 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 FHOD3Q2V2M9 1422 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 IGHV1OR15-1A0A075B7D0 117 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 TRAV9-2A0A087WT02 112 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 IGHV7-81A0A0B4J1V7 117 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 A0A1B0GW55 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 E7ENQ6 273 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF593O00488 134 aaPredicted RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 AQP9O43315 295 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ATP5HO75947 161 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 GP1BAP07359 652 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 OCM2P0CE71 109 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L2P0CJ85 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L3P0CJ86 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L4P0CJ87 422 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L5P0CJ88 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L6P0CJ89 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L7P0CJ90 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 T-ENOLP0DO92 83 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 LAMP1P11279 417 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 CSNK2A2P19784 350 aaPredicted RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 NTSP30990 170 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 GSK3BP49841 420 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 RPL14P50914 215 aaKnown RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 RPL31P62899 125 aaKnown RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC25A11Q02978 314 aaKnown RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ITGB3BPQ13352 177 aaPredicted RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC39A6Q13433 755 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 KCTD19Q17RG1 926 aaPredicted RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 LRRC36Q1X8D7 754 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 GOLGA7BQ2TAP0 167 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 NDUFAF6Q330K2 333 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC36A2Q495M3 483 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ZBED5Q49AG3 693 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ACTL10Q5JWF8 245 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 C9orf66Q5T8R8 295 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4L9Q6RFH8 374 aaPredicted RBP3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 NPSR1Q6W5P4 371 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PRSS41Q7RTY9 318 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PRR22Q8IZ63 422 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC22A18ASQ8N1D0 253 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PNKDQ8N490 385 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 ACBD4Q8NC06 268 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 OR51S1Q8NGJ8 323 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 OR51A7Q8NH64 312 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 MCOLN3Q8TDD5 553 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DOK4Q8TEW6 326 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 CDS1Q92903 461 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 TMEM54Q969K7 222 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 EEF1AKMT3Q96AZ1 226 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC45A3Q96JT2 553 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 HBEGFQ99075 208 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DCUN1D5Q9BTE7 237 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 RSG1Q9BU20 258 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PLEKHA1Q9HB21 404 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 SDHAF2Q9NX18 166 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 CALYQ9NYX4 217 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 DUX4Q9UBX2 424 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PRODH2Q9UF12 536 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 KCNE3Q9Y6H6 103 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 FRMPD3Q5JV73 1810 aa3.42□□□□□ -1.86
AC055878.1-201ENST00000531858 UNC13AQ9UPW8 1703 aa3.41□□□□□ -1.86
AC055878.1-201ENST00000531858 IGHV3OR16-13A0A075B7E8 117 aa3.41□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF816-ZNF321PA0A0X1KG74 233 aa3.41□□□□□ -1.86
AC055878.1-201ENST00000531858 EFCAB7A8K855 629 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms