RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 A0A1W2PPL8 197 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 M0R1B8 84 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 TFP02787 698 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 CELA3BP08861 270 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 PATE4P0C8F1 98 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 CD79AP11912 226 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 SPI1P17947 270 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 CAPGP40121 348 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 GUCA1AP43080 201 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 CENPAP49450 140 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 AQP4P55087 323 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 NAAAQ02083 359 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 SGCAQ16586 387 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 PCK2Q16822 640 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 LINC01590Q5TEZ4 76 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 C11orf40Q8WZ69 217 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 HCAR1Q9BXC0 346 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 MARCH7Q9H992 704 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 POLQO75417 2590 aa12.56□□□□□ -0.4
CPSF1-206ENST00000531480 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
CPSF1-206ENST00000531480 C12orf71A8MTZ7 269 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 DLGAP1O14490 977 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ABCD4O14678 606 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 MPZL2O60487 215 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 MPZL1O95297 269 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 PLAUP00749 431 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ZNF35P13682 527 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ZNF32P17041 273 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 SLC2A5P22732 501 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 BLVRAP53004 296 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 PCBD1P61457 104 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 PSG4Q00888 419 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 PIGFQ07326 219 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 SPOCK1Q08629 439 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 DBPQ10586 325 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-206ENST00000531480 AQP6Q13520 282 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ALKBH2Q6NS38 261 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 TMEM53Q6P2H8 277 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 UGT2A3Q6UWM9 527 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 TMEM200AQ86VY9 491 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 DEPDC4Q8N2C3 294 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 CYGBQ8WWM9 190 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 HRASLS5Q96KN8 279 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 ADI1Q9BV57 179 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 OR2H1Q9GZK4 316 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 C1orf198Q9H425 327 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 EMC7Q9NPA0 242 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 HINT3Q9NQE9 182 aaKnown RBP12.55□□□□□ -0.4
CPSF1-206ENST00000531480 KCNG2Q9UJ96 466 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
CPSF1-206ENST00000531480 IGHV2OR16-5A0A0B4J2B6 119 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 PRODHO43272 600 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 ICMTO60725 284 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 SNAP29O95721 258 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 RAB36O95755 333 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 GPANK1O95872 356 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 COX5BP10606 129 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CLUP10909 449 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CALCRP30988 508 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 GGT2P36268 569 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CAPZA2P47755 286 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 IDH3GP51553 393 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CSNK2BP67870 215 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 RAB39AQ14964 217 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
CPSF1-206ENST00000531480 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 LURAP1Q96LR2 239 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 MBOAT4Q96T53 435 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 PITX2Q99697 317 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 YTHDF1Q9BYJ9 559 aaKnown RBP12.54□□□□□ -0.4
CPSF1-206ENST00000531480 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CYB5R1Q9UHQ9 305 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 LHFPL6Q9Y693 200 aa12.54□□□□□ -0.4
CPSF1-206ENST00000531480 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 LOC100130705A0A1B0GUX0 176 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 FAM183AA6NL82 134 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms