RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 LCN6P62502 163 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 PPP2R2BQ00005 443 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 TRAP1Q12931 704 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 KCNMB1Q16558 191 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 MOGQ16653 247 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 FAM98BQ52LJ0 330 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 RPL13AP3Q6NVV1 102 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 LRP11Q86VZ4 500 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 GLB1L2Q8IW92 636 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 ZCCHC24Q8N2G6 241 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 ZNF786Q8N393 782 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 AKR7LQ8NHP1 331 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 SYNPRQ8TBG9 265 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 UBASH3BQ8TF42 649 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 ERMAPQ96PL5 475 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 SYT3Q9BQG1 590 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 ZNF416Q9BWM5 594 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 WNT5BQ9H1J7 359 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 SYT4Q9H2B2 425 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 SLCO1C1Q9NYB5 712 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 IL20RAQ9UHF4 553 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 DUSP13Q9UII6 198 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 NDRG4Q9ULP0 352 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 LYVE1Q9Y5Y7 322 aa10.4□□□□□ -0.74
TRAPPC4-209ENST00000528230 LOC100509620A0A075B734 347 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 TNFRSF11BO00300 401 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 SOCS2O14508 198 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 SLC16A7O60669 478 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 STAMBPO95630 424 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 SCG5P05408 212 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 LCKP06239 509 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 HOXB6P17509 224 aaKnown RBP10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 CCNOP22674 350 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 CRABP1P29762 137 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 CDKN2AP42771 156 aaKnown RBP10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 NR4A2P43354 598 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 KLF3P57682 345 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 SCRN3Q0VDG4 424 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 GK3PQ14409 553 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 TMEM249Q2WGJ8 235 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 PGBD2Q6P3X8 592 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 PGM2L1Q6PCE3 622 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 DNM1P34Q6PK57 102 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 PTCHD4Q6ZW05 846 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR4C15Q8NGM1 316 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR1J1Q8NGS3 322 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 FANK1Q8TC84 345 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 LRGUKQ96M69 825 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 FOXN4Q96NZ1 517 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 NUAK2Q9H093 628 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 COA3Q9Y2R0 106 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
TRAPPC4-209ENST00000528230 A0A1W2PPW3 197 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 C5orf49A4QMS7 147 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 AQP12BA6NM10 295 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ACOT8O14734 319 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 CCNB2O95067 398 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 PPP1R3DO95685 299 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 RENP00797 406 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 IGHV3-13P01766 116 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 RAP2AP10114 183 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 TUBG1P23258 451 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 AQP6Q13520 282 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF718Q3SXZ3 478 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 DNAL1Q4LDG9 190 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR2T5Q6IEZ7 315 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF770Q6IQ21 691 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF774Q6NX45 483 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ARL9Q6T311 187 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 UGT2A3Q6UWM9 527 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF620Q6ZNG0 422 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 AQP12AQ8IXF9 295 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR2T29Q8NH02 315 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 SAMD8Q96LT4 415 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 IFT27Q9BW83 186 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 ELOVL3Q9HB03 270 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 EMC7Q9NPA0 242 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 TUBG2Q9NRH3 451 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 IL20Q9NYY1 176 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 TAAR3PQ9P1P4 343 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 MYEF2Q9P2K5 600 aaKnown RBP10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 FZR1Q9UM11 496 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 B9D1Q9UPM9 204 aa10.38□□□□□ -0.75
TRAPPC4-209ENST00000528230 FN1P02751 2386 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 TLN2Q9Y4G6 2542 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 H3BSA7 217 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 GYG2O15488 501 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 SGCEO43556 437 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 UBOX5O94941 541 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 CLPTM1O96005 669 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 GASTP01350 101 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 HIST1H1CP16403 213 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 NOS3P29474 1203 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 WNT5AP41221 380 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 ALDH3B1P43353 468 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 ARHGDIAP52565 204 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms