RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SLITRK2Q9H156 845 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 MYLK2Q9H1R3 596 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 CDH20Q9HBT6 801 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF275Q9NSD4 429 aaPredicted RBP8.97□□□□□ -0.97
CPSF1-203ENST00000527916 UGT2A1Q9Y4X1 527 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 SNX13Q9Y5W8 968 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 IGKV1D-43A0A0B4J1Z2 117 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 J3KTA2 159 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 WNT9BO14905 357 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 PLPP2O43688 288 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 PIP5K1CO60331 668 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF682O95780 498 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 SERPINA1P01009 418 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 HPXP02790 462 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ADRA2CP18825 462 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 TCN1P20061 433 aaPredicted RBP8.96□□□□□ -0.98
CPSF1-203ENST00000527916 FUT4P22083 530 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 APLNRP35414 380 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 YAP1P46937 504 aaKnown RBP8.96□□□□□ -0.98
CPSF1-203ENST00000527916 NUDT2P50583 147 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 MOGQ16653 247 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 UNQ6126/PRO20091Q6UXV3 157 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF730Q6ZMV8 503 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 FOXL2NBQ6ZUU3 175 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 MBOAT2Q6ZWT7 520 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 RRM2BQ7LG56 351 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 LRP11Q86VZ4 500 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 CYP4Z1Q86W10 505 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 LRRC18Q8N456 261 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 SYNPRQ8TBG9 265 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 POM121L2Q96KW2 1035 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ELAC2Q9BQ52 826 aaKnown RBP8.96□□□□□ -0.98
CPSF1-203ENST00000527916 SYT3Q9BQG1 590 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF665Q9H7R5 613 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 CCNB1IP1Q9NPC3 277 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 SLCO1C1Q9NYB5 712 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 NKIRAS2Q9NYR9 191 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 MYEF2Q9P2K5 600 aaKnown RBP8.96□□□□□ -0.98
CPSF1-203ENST00000527916 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.98
CPSF1-203ENST00000527916 RHCGQ9UBD6 479 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 RPS6KA6Q9UK32 745 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 ENPP4Q9Y6X5 453 aa8.96□□□□□ -0.98
CPSF1-203ENST00000527916 A0A1W2PRQ8 180 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 EFCAB9A8MZ26 197 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SNX3O60493 162 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 ICMTO60725 284 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SLC2A10O95528 541 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 CST2P09228 141 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 CCL2P13500 99 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 STOMP27105 288 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 CDAP32320 146 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 GUCA1AP43080 201 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 ALDH3B1P43353 468 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SEC24CP53992 1094 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 KLF3P57682 345 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 PSME3P61289 254 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 PCBD1P61457 104 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 HSF2Q03933 536 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 CD47Q08722 323 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 DGCR6Q14129 220 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SGCAQ16586 387 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 ZBED5Q49AG3 693 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 PABPC1L2AQ5JQF8 200 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 GLYATQ6IB77 296 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 TSEN54Q7Z6J9 526 aaKnown RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 ALDH16A1Q8IZ83 802 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 PAQR4Q8N4S7 273 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SIGLECL1Q8N7X8 197 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 CPEB3Q8NE35 698 aaKnown RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 OR51A7Q8NH64 312 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 C22orf15Q8WYQ4 148 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SLC25A28Q96A46 364 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 HSH2DQ96JZ2 352 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 GPA33Q99795 319 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 KCTD14Q9BQ13 255 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 C7orf69Q9H7B7 122 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 GORASP2Q9H8Y8 452 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 NMNAT1Q9HAN9 279 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 SPAG4Q9NPE6 437 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 DCAF13Q9NV06 445 aaKnown RBP8.95□□□□□ -0.98
CPSF1-203ENST00000527916 TMEM5Q9Y2B1 443 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 TIMM10BQ9Y5J6 103 aa8.95□□□□□ -0.98
CPSF1-203ENST00000527916 TRAV27A0A087WT01 109 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 A0A1W2PPW3 197 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 C17orf100A8MU93 164 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 CDC42EP2O14613 210 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 PTP4A3O75365 173 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 CLPTM1O96005 669 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 LCKP06239 509 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 CD14P08571 375 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 FAM157BP0CG42 384 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF32P17041 273 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 RHCEP18577 417 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 GCH1P30793 250 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 PSG4Q00888 419 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 FMODQ06828 376 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 MAD2L1BPQ15013 274 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms