RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RAP1AP62834 184 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 SLC3A1Q07837 685 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 MBNL2Q5VZF2 373 aaKnown RBP19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZNF774Q6NX45 483 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 ARL9Q6T311 187 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 C1orf229Q6ZS94 237 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 OAFQ86UD1 273 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 NRMQ8IXM6 262 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 GCDHQ92947 438 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 C4orf45Q96LM5 186 aa19.01■□□□□ 0.63
TRAPPC4-208ENST00000527680 TRAV27A0A087WT01 109 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 C12orf71A8MTZ7 269 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 EFCAB9A8MZ26 197 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 TRIM77I1YAP6 450 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 DEAF1O75398 565 aaPredicted RBP19■□□□□ 0.63
TRAPPC4-208ENST00000527680 NGFP01138 241 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 CFPP27918 469 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 FAM205BPQ63HN1 556 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 SEMA6DQ8NFY4 1073 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 JMJD8Q96S16 334 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 FGFR1OP2Q9NVK5 253 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZDHHC8Q9ULC8 765 aa19■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZSCAN5BA6NJL1 495 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 TIMM8AO60220 97 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 IFNW1P05000 195 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 ADRA2CP18825 462 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 RPL4P36578 427 aaKnown RBP18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 TRAM2Q15035 370 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 RFPL4BQ6ZWI9 263 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 RRM2BQ7LG56 351 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 NANPQ8TBE9 248 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 ST7LQ8TDW4 575 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 TMPRSS13Q9BYE2 586 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 C7orf69Q9H7B7 122 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 MSL2Q9HCI7 577 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 GRHPRQ9UBQ7 328 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 ARHGAP32A7KAX9 2087 aa18.99■□□□□ 0.63
TRAPPC4-208ENST00000527680 J3KTA2 159 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 J3QLI3 93 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 GSTA4O15217 222 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZNF682O95780 498 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 IGHMP01871 453 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 MSR1P21757 451 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 LCN2P80188 198 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 PRKCDQ05655 676 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZMAT1Q5H9K5 638 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZNF730Q6ZMV8 503 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 FKBP9P1Q75LS8 142 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 VTCN1Q7Z7D3 282 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 ZER1Q7Z7L7 766 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 GEMIN6Q8WXD5 167 aaKnown RBP18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 DCLRE1CQ96SD1 692 aaKnown RBP18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 DIRC2Q96SL1 478 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 CGGBP1Q9UFW8 167 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 NDRG4Q9ULP0 352 aaKnown RBP18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 SNX13Q9Y5W8 968 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 CAPN7Q9Y6W3 813 aa18.98■□□□□ 0.63
TRAPPC4-208ENST00000527680 H7C1C5 153 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 UBOX5O94941 541 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 ABHD16AO95870 558 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 SBK2P0C263 348 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 FUT4P22083 530 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 HILS1P60008 231 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 LCN6P62502 163 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 TNFAIP6P98066 277 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 ANKDD1AQ495B1 522 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 MTX3Q5HYI7 312 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 TMEM255AQ5JRV8 349 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 USP43Q70EL4 1123 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 SYT9Q86SS6 491 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 RNF113BQ8IZP6 322 aaKnown RBP18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 BPIFB2Q8N4F0 458 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 C3orf56Q8N813 242 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 LRRC75AQ8NAA5 344 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 RCN3Q96D15 328 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 SUCNR1Q9BXA5 334 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 EMC7Q9NPA0 242 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 KLHL21Q9UJP4 597 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 AP3M1Q9Y2T2 418 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 DYSFO75923 2080 aa18.97■□□□□ 0.63
TRAPPC4-208ENST00000527680 H3BSA7 217 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 XKRYO14609 159 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 GSTM3P21266 225 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 GATA3P23771 443 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 SLC9A3P48764 834 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 ENDOGQ14249 297 aaKnown RBP18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 C1QL2Q7Z5L3 287 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 OFCC1Q8IZS5 231 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 POU5F2Q8N7G0 328 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 OR13C2Q8NGS9 318 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 FAM216AQ8WUB2 273 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 ACOT11Q8WXI4 607 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 POLE4Q9NR33 117 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 CMTM6Q9NX76 183 aa18.96■□□□□ 0.63
TRAPPC4-208ENST00000527680 ADH4P08319 380 aa18.95■□□□□ 0.62
TRAPPC4-208ENST00000527680 TNFSF4P23510 183 aa18.95■□□□□ 0.62
TRAPPC4-208ENST00000527680 FPR2P25090 351 aa18.95■□□□□ 0.62
TRAPPC4-208ENST00000527680 GPR4P46093 362 aa18.95■□□□□ 0.62
TRAPPC4-208ENST00000527680 PSG7Q13046 419 aa18.95■□□□□ 0.62
TRAPPC4-208ENST00000527680 SPRNQ5BIV9 151 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms