RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 MRPS34P82930 218 aaKnown RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 PAX2Q02962 417 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 GABPB1Q06547 395 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 BNIP1Q12981 228 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 SCGB2A2Q13296 93 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 HFEQ30201 348 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 SLC25A47Q6Q0C1 308 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 DACT3Q96B18 629 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ELMOD3Q96FG2 381 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 SH3GL1Q99961 368 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 DECR2Q9NUI1 292 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 UBAP1Q9NZ09 502 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 SELENONQ9NZV5 590 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 CORO2BQ9UQ03 480 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 PPIAL4EA0A075B759 164 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 PPIAL4CA0A0B4J2A2 164 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 TRAPPC13A5PLN9 417 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 B2RBV5 119 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 BLOC1S5-TXNDC5H3BN57 136 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 SERPINB7O75635 380 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 FARS2O95363 451 aaKnown RBP12.01□□□□□ -0.49
CPSF1-201ENST00000526271 CD55P08174 381 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 PPIAL4FP0DN26 164 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 CCNOP22674 350 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 NUDT2P50583 147 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 CLRN1P58418 232 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 DEFA6Q01524 100 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 TEKQ02763 1124 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 PSG7Q13046 419 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF154Q13106 437 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 TTC33Q6PID6 262 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-201ENST00000526271 SHISA2Q6UWI4 295 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 TMEM255BQ8WV15 326 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 RAB1CQ92928 201 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 SLC19A3Q9BZV2 496 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 OR2H1Q9GZK4 316 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 C1orf21Q9H246 121 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 C1orf198Q9H425 327 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 KAT8Q9H7Z6 458 aaKnown RBP12.01□□□□□ -0.49
CPSF1-201ENST00000526271 UNKLQ9H9P5 680 aaKnown RBP12.01□□□□□ -0.49
CPSF1-201ENST00000526271 SIAEQ9HAT2 523 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 CMTM6Q9NX76 183 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 INSIG2Q9Y5U4 225 aa12.01□□□□□ -0.49
CPSF1-201ENST00000526271 IQCMA0A1B0GVH7 501 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 MDFIC2A0A1B0GVS7 189 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 C5orf49A4QMS7 147 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 A8MXK9 166 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 PIP5K1CO60331 668 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 OR7A10O76100 309 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 GATA3P23771 443 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 SLC6A9P48067 706 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 PSME3P61289 254 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 FOXL1Q12952 345 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 CDK5R2Q13319 367 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
CPSF1-201ENST00000526271 LAPTM4AQ15012 233 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ZMYND11Q15326 602 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 SLC9A3R2Q15599 337 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 TREML4Q6UXN2 200 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 NANOGNBQ7Z5D8 188 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ARPINQ7Z6K5 226 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 PGAM4Q8N0Y7 254 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 C11orf65Q8NCR3 313 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 OR1J2Q8NGS2 313 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 LIPHQ8WWY8 451 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 NSMAFQ92636 917 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF583Q96ND8 569 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 DCLRE1CQ96SD1 692 aaKnown RBP12□□□□□ -0.49
CPSF1-201ENST00000526271 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
CPSF1-201ENST00000526271 NDE1Q9NXR1 346 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 TAS2R1Q9NYW7 299 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ABCD2Q9UBJ2 740 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 EGFL7Q9UHF1 273 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 GPR160Q9UJ42 338 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 ANGPT4Q9Y264 503 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 AP3M1Q9Y2T2 418 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 NPTNQ9Y639 398 aa12□□□□□ -0.49
CPSF1-201ENST00000526271 IGHV3OR16-10A0A075B7F0 116 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ISPDA4D126 451 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 CENPBD1B2RD01 187 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 EBAG9O00559 213 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ATP5HO75947 161 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 MT-ND1P03886 318 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 RNASE1P07998 156 aaKnown RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 MDKP21741 143 aaPredicted RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 LAP3P28838 519 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 CD80P33681 288 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 PCGF2P35227 344 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms