RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 GKAP1Q5VSY0 366 aaPredicted RBP5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 FAM166AQ6J272 317 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 FOXL2NBQ6ZUU3 175 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 TMPRSS11FQ6ZWK6 438 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SLC16A14Q7RTX9 510 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 NANOGNBQ7Z5D8 188 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 ARPINQ7Z6K5 226 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 C1orf174Q8IYL3 243 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 OFCC1Q8IZS5 231 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 LINC01356Q8N9X3 169 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SYT14Q8NB59 555 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SYT8Q8NBV8 401 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SLC30A7Q8NEW0 376 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 C11orf40Q8WZ69 217 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 LZICQ8WZA0 190 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 HDAC2Q92769 488 aaKnown RBP5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 NABP1Q96AH0 204 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 BPIFA2Q96DR5 249 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 POM121L2Q96KW2 1035 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 PRRC1Q96M27 445 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 WACQ9BTA9 647 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 ZNF416Q9BWM5 594 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 BCL2L14Q9BZR8 327 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SHARPINQ9H0F6 387 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 LRMDAQ9H2I8 198 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 CHODLQ9H9P2 273 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 DYNLRB1Q9NP97 96 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 HINT3Q9NQE9 182 aaKnown RBP5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SLCO1C1Q9NYB5 712 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 MYEF2Q9P2K5 600 aaKnown RBP5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 DUSP13Q9UII6 198 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 KLHL21Q9UJP4 597 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 ZNF346Q9UL40 294 aaKnown RBP5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 KCNS2Q9ULS6 477 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 SNX13Q9Y5W8 968 aa5.08□□□□□ -1.6
CCDC90B-204ENST00000525504 LOC100509620A0A075B734 347 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 A0A087WUU8 490 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 A0A1W2PRQ8 180 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SHISA3A0PJX4 238 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SH3PXD2BA1X283 911 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 GMNCA6NCL1 334 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 RNF212BA8MTL3 300 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 C17orf100A8MU93 164 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 LYNX1G3V0Z9 82 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 PHF1O43189 567 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 CCDC22O60826 627 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SHOX2O60902 331 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 CLPTM1O96005 669 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ADH4P08319 380 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 CST2P09228 141 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 LYNX1P0DP58 116 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 UMPSP11172 480 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 NR2C1P13056 603 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 COX4I1P13073 169 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ZNF26P17031 533 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 TCN1P20061 433 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MAKP20794 623 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ACHEP22303 614 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 TUBG1P23258 451 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 IL2RGP31785 369 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 IFNA8P32881 189 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MDH1P40925 334 aaKnown RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ALDH3B1P43353 468 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SLC9A3P48764 834 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ZNF84P51523 738 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 DVL1P1P54792 670 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 GYS2P54840 703 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 CLRN1P58418 232 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SELENOVP59797 346 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 RPL27P61353 136 aaKnown RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 LMO4P61968 165 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 PSG4Q00888 419 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 LIPEQ05469 1076 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 DGCR6Q14129 220 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MELKQ14680 651 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 TRAM2Q15035 370 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 TRIP10Q15642 601 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 PCGF3Q3KNV8 242 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ALG10Q5BKT4 473 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 PABPC1L2AQ5JQF8 200 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 FAM209AQ5JX71 171 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 FAM205BPQ63HN1 556 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 TMEM53Q6P2H8 277 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 DEF8Q6ZN54 512 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MBOAT2Q6ZWT7 520 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 VTCN1Q7Z7D3 282 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 PHC2Q8IXK0 858 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 NRMQ8IXM6 262 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 NOXO1Q8NFA2 376 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SYNPRQ8TBG9 265 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 FNDC8Q8TC99 324 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ACOT11Q8WXI4 607 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 YIPF5Q969M3 257 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 RCN3Q96D15 328 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MARS2Q96GW9 593 aaKnown RBP5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 RBP7Q96R05 134 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 SYT3Q9BQG1 590 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 MYLK2Q9H1R3 596 aa5.07□□□□□ -1.6
CCDC90B-204ENST00000525504 ANKRD19PQ9H560 264 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms