RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 SLC22A5O76082 557 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SRP72O76094 671 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 CXCL14O95715 111 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PIGRP01833 764 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 UGT2B4P06133 528 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ACSM4P0C7M7 580 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 MSR1P21757 451 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ACP1P24666 158 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 CYP2F1P24903 491 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ATP5A1P25705 553 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 PSMB5P28074 263 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SLC6A1P30531 599 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 OTX2P32243 289 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 P2RY2P41231 377 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 IER3P46695 156 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SERPINB10P48595 397 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 RBP2P50120 134 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 UCP2P55851 309 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 LYZP61626 148 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 COPZ1P61923 177 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ESRRGP62508 458 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PPIAP62937 165 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 MYBPC1Q00872 1141 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 IL5RAQ01344 420 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SCN1BQ07699 218 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PUDPQ08623 228 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ARL6IP1Q15041 203 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SLC9A3R2Q15599 337 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 NDUFAF6Q330K2 333 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ZBED5Q49AG3 693 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PABPC1L2AQ5JQF8 200 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 GPR157Q5UAW9 335 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 KHDRBS2Q5VWX1 349 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 UGT2A3Q6UWM9 527 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PAMR1Q6UXH9 720 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 LRRN1Q6UXK5 716 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 FAM151BQ6UXP7 276 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ASCL4Q6XD76 172 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 CYHR1Q6ZMK1 362 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ZNF730Q6ZMV8 503 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 GCNT7Q6ZNI0 430 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PID1Q7Z2X4 250 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 VTCN1Q7Z7D3 282 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PUSL1Q8N0Z8 303 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 CCDC197Q8NCU1 140 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 OR4M1Q8NGD0 313 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 OR13F1Q8NGS4 319 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 CXorf40AQ8TE69 158 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 FAM172AQ8WUF8 416 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SFT2D1Q8WV19 159 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ARNTL2Q8WYA1 636 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 GTF2H4Q92759 462 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 L3HYPDHQ96EM0 354 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SH3YL1Q96HL8 342 aaPredicted RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 MCCC1Q96RQ3 725 aaPredicted RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 ZNF607Q96SK3 696 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 PFDN5Q99471 154 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ZNF184Q99676 751 aaPredicted RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 ELOVL4Q9GZR5 314 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ILKAPQ9H0C8 392 aaPredicted RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 MAGT1Q9H0U3 335 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 RAB1BQ9H0U4 201 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 GANQ9H2C0 597 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ANKRA2Q9H9E1 313 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 UGT1A7Q9HAW7 530 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 UGT1A10Q9HAW8 530 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 UGT1A8Q9HAW9 530 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SIRT7Q9NRC8 400 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 GPR173Q9NS66 373 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 CUTCQ9NTM9 273 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 FGFR1OP2Q9NVK5 253 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 SMOXQ9NWM0 555 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ANAPC11Q9NYG5 84 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ZNF319Q9P2F9 582 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ANAPC7Q9UJX3 599 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 FBXL3Q9UKT7 428 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 TBC1D24Q9ULP9 559 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 MYOM2P54296 1465 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 CCDC141Q6ZP82 1450 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 MBD5Q9P267 1494 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 EHBP1L1Q8N3D4 1523 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 DLC1Q96QB1 1528 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 NRAPQ86VF7 1730 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 XRN1Q8IZH2 1706 aaKnown RBP2.88□□□□□ -1.95
CD44-217ENST00000525348 WDR90Q96KV7 1748 aa2.88□□□□□ -1.95
CD44-217ENST00000525348 ARHGEF10O15013 1369 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 MYH6P13533 1939 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ABCC12Q96J65 1359 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ATP10DQ9P241 1426 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 EIF2AK4Q9P2K8 1649 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 KIF1BO60333 1816 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 MGAT4DA6NG13 374 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SERPINE3A8MV23 424 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 H3BSA7 217 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 M0QZ92 97 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 DNASE2O00115 360 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 PHYHO14832 338 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 STX7O15400 261 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 CHP2O43745 196 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SNNO75324 88 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms