RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ATP5SQ99766 215 aa2.28□□□□□ -2.04
CD44-215ENST00000525241 FGF20Q9NP95 211 aaPredicted RBP2.28□□□□□ -2.04
CD44-215ENST00000525241 COX16Q9P0S2 106 aa2.28□□□□□ -2.04
CD44-215ENST00000525241 STARD10Q9Y365 291 aa2.28□□□□□ -2.04
CD44-215ENST00000525241 TMED5Q9Y3A6 229 aa2.28□□□□□ -2.04
CD44-215ENST00000525241 RPL36A-HNRNPH2H7BZ11 118 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 CDC7O00311 574 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 CCNKO75909 580 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 YIF1AO95070 293 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 TSPAN13O95857 204 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 OR5H8P0DN80 308 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 CCNB1P14635 433 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 NSG1P42857 185 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 DDX39BQ13838 428 aaKnown RBP2.27□□□□□ -2.05
CD44-215ENST00000525241 IRF4Q15306 451 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 SF3A2Q15428 464 aaKnown RBP2.27□□□□□ -2.05
CD44-215ENST00000525241 PRSS8Q16651 343 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 VPS26BQ4G0F5 336 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 THEM4Q5T1C6 240 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 MYOCDQ8IZQ8 938 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 OSR2Q8N2R0 312 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 OR52P1PQ8NH57 321 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 FBXO32Q969P5 355 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 DUS3LQ96G46 650 aaKnown RBP2.27□□□□□ -2.05
CD44-215ENST00000525241 ZNF382Q96SR6 550 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 OSBPL11Q9BXB4 747 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 METTL7AQ9H8H3 244 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 CTSFQ9UBX1 484 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 GOLT1BQ9Y3E0 138 aa2.27□□□□□ -2.05
CD44-215ENST00000525241 DOCK9Q9BZ29 2069 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 GLYATL1P3A0A0U1RQE8 302 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 CRYGBP07316 175 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 POLR2MP0CAP2 368 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 UBTFL6P0CB48 400 aaPredicted RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 GPX4P36969 197 aaPredicted RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 CX3CR1P49238 355 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 RND2P52198 227 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 CACNG7P62955 275 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 CEP55Q53EZ4 464 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 METTL21CQ5VZV1 264 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 RNASEKQ6P5S7 137 aaKnown RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 SASS6Q6UVJ0 657 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 TMEM107Q6UX40 140 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 CDR2LQ86X02 465 aaPredicted RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 PRSS58Q8IYP2 241 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 NECAB1Q8N987 351 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 NECAP1Q8NC96 275 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 SPATA4Q8NEY3 305 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 OR8U1Q8NH10 309 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 COQ8AQ8NI60 647 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 ZNF502Q8TBZ5 544 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 ZNF606Q8WXB4 792 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 MRGPRFQ96AM1 343 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 RNF5Q99942 180 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 FOXC2Q99958 501 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 ULBP2Q9BZM5 246 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 SPNS1Q9H2V7 528 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 WFDC1Q9HC57 220 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 FAM49BQ9NUQ9 324 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 DDX19AQ9NUU7 478 aaKnown RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 SLC2A8Q9NY64 477 aa2.26□□□□□ -2.05
CD44-215ENST00000525241 PSMC3IPQ9P2W1 217 aaPredicted RBP2.26□□□□□ -2.05
CD44-215ENST00000525241 PCM1Q15154 2024 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 CAMTA1Q9Y6Y1 1673 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 RRP8O43159 456 aaKnown RBP2.25□□□□□ -2.05
CD44-215ENST00000525241 APCSP02743 223 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 OR56A5P0C7T3 313 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 CHMLP26374 656 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 OPRK1P41145 380 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 ACTR3P61158 418 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 ZNF816Q0VGE8 651 aaPredicted RBP2.25□□□□□ -2.05
CD44-215ENST00000525241 CDC20Q12834 499 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 SMUG1Q53HV7 270 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 CALHM1Q8IU99 346 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 ZFP41Q8N8Y5 198 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 SLC7A13Q8TCU3 470 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 CCDC126Q96EE4 140 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 L3HYPDHQ96EM0 354 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 GALNT14Q96FL9 552 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 CNDP1Q96KN2 507 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 RACGAP1Q9H0H5 632 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 KCNE3Q9Y6H6 103 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 YEATS2Q9ULM3 1422 aa2.25□□□□□ -2.05
CD44-215ENST00000525241 IGLV3-12A0A075B6K2 115 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 IGLV1-36A0A0B4J1U3 117 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 BPY2O14599 106 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 RAB29O14966 203 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 CCNE2O96020 404 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 SERPINA5P05154 406 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 F2RP25116 425 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 CEACAM3P40198 252 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 SLC11A1P49279 550 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
CD44-215ENST00000525241 ADARB1P78563 741 aaKnown RBP2.24□□□□□ -2.05
CD44-215ENST00000525241 CDH17Q12864 832 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 SSX2Q16385 188 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 ORMDL2Q53FV1 153 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 DNLZQ5SXM8 178 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms