RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SYNPRQ8TBG9 265 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 FANK1Q8TC84 345 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 BCAS4Q8TDM0 211 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 GNPDA2Q8TDQ7 276 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 UBASH3BQ8TF42 649 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 C11orf40Q8WZ69 217 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 CCDC124Q96CT7 223 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 TSSK2Q96PF2 358 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 GPX7Q96SL4 187 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 NUAK2Q9H093 628 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 OR52D1Q9H346 318 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 TAS2R1Q9NYW7 299 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 TAAR3PQ9P1P4 343 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 NDUFS8O00217 210 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 TNFRSF11BO00300 401 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 AHCYL1O43865 530 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 HPXP02790 462 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 FPR3P25089 353 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 SLC6A6P31641 620 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 IFNGR2P38484 337 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 GSSP48637 474 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 PCBD1P61457 104 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 LCN8Q6JVE9 175 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 PGBD2Q6P3X8 592 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 ALDH16A1Q8IZ83 802 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZNF101Q8IZC7 436 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 THTPAQ9BU02 230 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 IFT27Q9BW83 186 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 BCL2L14Q9BZR8 327 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 BPESC1Q9GZL8 116 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 MS4A5Q9H3V2 200 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 SRA1Q9HD15 236 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 MYOZ1Q9NP98 299 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 VSX1Q9NZR4 365 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 EIF3KQ9UBQ5 218 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 LYVE1Q9Y5Y7 322 aa11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 NSD1Q96L73 2696 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZFHX3Q15911 3703 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 CSPG4Q6UVK1 2322 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
TRAPPC4-205ENST00000525079 DCTN6O00399 190 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 KRT36O76013 467 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 UBOX5O94941 541 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 TXNDC12O95881 172 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 NGFP01138 241 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 IGHV4-31P0DP07 118 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZNF250P15622 560 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 COL8A2P25067 703 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 MPV17P39210 176 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 MAGEB1P43366 347 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 KLF3P57682 345 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-205ENST00000525079 SELENOVP59797 346 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 TSPAN31Q12999 210 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 MEP1BQ16820 701 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 MTX3Q5HYI7 312 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 CLEC12AQ5QGZ9 265 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 SLC35F1Q5T1Q4 408 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 LEG1Q6P5S2 330 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 TRPM8Q7Z2W7 1104 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 ADCK1Q86TW2 530 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 GLB1L2Q8IW92 636 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZNF786Q8N393 782 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 OR4C15Q8NGM1 316 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 OR4K13Q8NH42 304 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 ABHD4Q8TB40 342 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 SLC25A40Q8TBP6 338 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 LRGUKQ96M69 825 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 NMNAT3Q96T66 252 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 MUC13Q9H3R2 512 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 FN3KQ9H479 309 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 EGLN3Q9H6Z9 239 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 VNN3Q9NY84 501 aa11□□□□□ -0.65
TRAPPC4-205ENST00000525079 PRPF19Q9UMS4 504 aaKnown RBP11□□□□□ -0.65
TRAPPC4-205ENST00000525079 CHD3Q12873 2000 aaKnown RBP11□□□□□ -0.65
TRAPPC4-205ENST00000525079 IGLV3-9A0A075B6K5 115 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 LRP5LA4QPB2 252 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 TLX2O43763 284 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 DOK2O60496 412 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 CCNB2O95067 398 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 GASTP01350 101 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 HIST1H1CP16403 213 aaKnown RBP10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZNF16P17020 682 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 NOS3P29474 1203 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 MAGEA2P43356 314 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 HMGA2P52926 109 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 FAM98BQ52LJ0 330 aaKnown RBP10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 TMEM255AQ5JRV8 349 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 ELFN2Q5R3F8 820 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 CYB5R2Q6BCY4 276 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 ZNF620Q6ZNG0 422 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 RFPL4BQ6ZWI9 263 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 SYT9Q86SS6 491 aa10.99□□□□□ -0.65
TRAPPC4-205ENST00000525079 JAZF1Q86VZ6 243 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms