RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 TNFSF18Q9UNG2 199 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 TRBV5-7A0A0A0MS05 114 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 ARPC3O15145 178 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 FOXS1O43638 330 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 MAOBP27338 520 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 MAPK3P27361 379 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 PSMD4P55036 377 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 SMAD2Q15796 467 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 HFEQ30201 348 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 RNF144BQ7Z419 303 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 EIF4E3Q8N5X7 224 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 CHST4Q8NCG5 386 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 OR10R2Q8NGX6 335 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF417Q8TAU3 575 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 GPX8Q8TED1 209 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 TAAR8Q969N4 342 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 VSTM2LQ96N03 204 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 SPACA5Q96QH8 159 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 TREM1Q9NP99 234 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 OR2S2Q9NQN1 319 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 SPACA6W5XKT8 324 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 KIF26BQ2KJY2 2108 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 PCNX3Q9H6A9 2034 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF736B4DX44 427 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 EIF1AYO14602 144 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 WDPCPO95876 746 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 SPP1P10451 314 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 GDI1P31150 447 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 CASRP41180 1078 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 RPS4XP62701 263 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 RBM39Q14498 530 aaKnown RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 SLC35D3Q5M8T2 416 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 TMEM17Q86X19 198 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 AVL9Q8NBF6 648 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 OR5M8Q8NGP6 311 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 ELP5Q8TE02 316 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 PHYHIPQ92561 330 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 MCHR2Q969V1 340 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 POM121Q96HA1 1249 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-202ENST00000524773 MED12Q93074 2177 aa11.87□□□□□ -0.51
CAPN1-202ENST00000524773 FANCMQ8IYD8 2048 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 VPS13AQ96RL7 3174 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 TMEM218A2RU14 115 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 C5orf51A6NDU8 294 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 URADA6NGE7 173 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 MPTX1A8MV57 137 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 BCL2L11O43521 198 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN1-202ENST00000524773 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-202ENST00000524773 CYB5AP00167 134 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 SDHAP31040 664 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF550Q7Z398 422 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 MRPL48Q96GC5 212 aaKnown RBP11.86□□□□□ -0.51
CAPN1-202ENST00000524773 INTS14Q96SY0 518 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 METTL12A8MUP2 240 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 C5orf67F2Z3F1 127 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 PMS2P2O95744 297 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 HNRNPA1P09651 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF735P0CB33 412 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 HPGDP15428 266 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 ID4P47928 161 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 C1orf61Q13536 156 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 TGIF1Q15583 401 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 H3F3CQ6NXT2 135 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 MED25Q71SY5 747 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF595Q8IYB9 648 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF563Q8TA94 476 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 MMP25Q9NPA2 562 aa11.86□□□□□ -0.51
CAPN1-202ENST00000524773 GPN3Q9UHW5 284 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-202ENST00000524773 SULT2B1O00204 365 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 CD1AP06126 327 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 PAN3Q58A45 887 aaKnown RBP11.85□□□□□ -0.51
CAPN1-202ENST00000524773 TMEM225Q6GV28 225 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 LINC00346Q8IVM7 164 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 FOXRED2Q8IWF2 684 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-202ENST00000524773 OR2I1PQ8NGU4 316 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 THAP6Q8TBB0 222 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 RSC1A1Q92681 617 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
CAPN1-202ENST00000524773 HRH4Q9H3N8 390 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 TAS2R8Q9NYW2 309 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 SLC16A7O60669 478 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 NUDT14O95848 222 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 CA3P07451 260 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 NAT2P11245 290 aa11.85□□□□□ -0.51
CAPN1-202ENST00000524773 TACR3P29371 465 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms