RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 SMARCB1Q12824 385 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 GUCA2BQ16661 112 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TMEM183BQ1AE95 376 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TSPO2Q5TGU0 170 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 PRAMEF5Q5TYX0 476 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 PRAMEF6Q5VXH4 476 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 LYPD2Q6UXB3 125 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 LINC01551Q86U37 167 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TMEM135Q86UB9 458 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TMEM183AQ8IXX5 376 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 PUSL1Q8N0Z8 303 aaKnown RBP2.38□□□□□ -2.03
PCM1-220ENST00000523896 DUSP18Q8NEJ0 188 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 OR2G2Q8NGZ5 317 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 CD300LFQ8TDQ1 290 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 SDR42E1Q8WUS8 393 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 FBXO32Q969P5 355 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 SGK3Q96BR1 496 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 OSBPL10Q9BXB5 764 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TMEM59Q9BXS4 323 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 CDC42EP4Q9H3Q1 356 aaKnown RBP2.38□□□□□ -2.03
PCM1-220ENST00000523896 YTHDC2Q9H6S0 1430 aaKnown RBP2.38□□□□□ -2.03
PCM1-220ENST00000523896 METTL7AQ9H8H3 244 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 TM9SF3Q9HD45 589 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 ETNK2Q9NVF9 386 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 PCYOX1Q9UHG3 505 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 ADAMTSL1Q8N6G6 1762 aa2.38□□□□□ -2.03
PCM1-220ENST00000523896 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
PCM1-220ENST00000523896 HTTP42858 3142 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 TRPM3Q9HCF6 1732 aaPredicted RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 MTCL1Q9Y4B5 1905 aaKnown RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 NSD3Q9BZ95 1437 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 LTN1O94822 1766 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 A0A096LNJ9 63 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 A0A0B4J2A0 478 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 IGKV1D-13A0A0B4J2D9 117 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 A0A1B0GVI7 797 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ZNF726A6NNF4 738 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 XKRYO14609 159 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 GOSR2O14653 212 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SNAI2O43623 268 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 IGHDP01880 384 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 BGLAPP02818 100 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ZDHHC11BP0C7U3 371 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SMIM10L1P0DMW3 83 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 IGKV1-13P0DP09 117 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ZNF30P17039 623 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 CCR8P51685 355 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ACTR3P61158 418 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 IRX3P78415 501 aaPredicted RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 ZNF92Q03936 586 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 LRRC63Q05C16 580 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 AQP6Q13520 282 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SSX2Q16385 188 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 VAX1Q5SQQ9 334 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 LHFPL3Q86UP9 236 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 CDR2LQ86X02 465 aaPredicted RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 OR9K2Q8NGE7 335 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ACTRT1Q8TDG2 376 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SMIM10Q96HG1 83 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 RARRES2Q99969 163 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SLCO1B3Q9NPD5 702 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SHPKQ9UHJ6 478 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 ZNF223Q9UK11 482 aaPredicted RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 HPCAL4Q9UM19 191 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
PCM1-220ENST00000523896 ARHGAP21Q5T5U3 1957 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 SLIT3O75094 1523 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
PCM1-220ENST00000523896 DOPEY1Q5JWR5 2465 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 USP47Q96K76 1375 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 IGLV4-69A0A075B6H9 119 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 IGLV11-55A0A075B6I3 123 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 PLAC8L1A1L4L8 177 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 EIF3GO75821 320 aaKnown RBP eCLIP2.36□□□□□ -2.03
PCM1-220ENST00000523896 ZNF32P17041 273 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 CNR1P21554 472 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 OMGP23515 440 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 CASP14P31944 242 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 IFNA8P32881 189 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 ATP5IP56385 69 aaPredicted RBP2.36□□□□□ -2.03
PCM1-220ENST00000523896 HMGCS1Q01581 520 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 PAX5Q02548 391 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 MADCAM1Q13477 382 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 GGTLC2Q14390 218 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 KCTD19Q17RG1 926 aaPredicted RBP2.36□□□□□ -2.03
PCM1-220ENST00000523896 RSPO1Q2MKA7 263 aaPredicted RBP2.36□□□□□ -2.03
PCM1-220ENST00000523896 ZBED5Q49AG3 693 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 TFDP3Q5H9I0 405 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
PCM1-220ENST00000523896 C12orf56Q8IXR9 622 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 TMEM54Q969K7 222 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 DNAJC19Q96DA6 116 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 MED8Q96G25 268 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 TPD52L3Q96J77 140 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 TSSK3Q96PN8 268 aa2.36□□□□□ -2.03
PCM1-220ENST00000523896 TAAR1Q96RJ0 339 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms