RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 REEP5Q00765 189 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 GNA12Q03113 381 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 DPTQ07507 201 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 TAF13Q15543 124 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 MICBQ29980 383 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CTU2Q2VPK5 515 aaKnown RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 AGKQ53H12 422 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 COQ5Q5HYK3 327 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 C1orf146Q5VVC0 180 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CDHR3Q6ZTQ4 885 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ZNF534Q76KX8 674 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 TBC1D26Q86UD7 250 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 HAPLN4Q86UW8 402 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ANKRD46Q86W74 232 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CROCCP3Q8IVE0 287 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 TMEM123Q8N131 208 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ZNF567Q8N184 647 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 GABRG1Q8N1C3 465 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 TEX26Q8N6G2 289 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CCDC185Q8N715 623 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 HCAR2Q8TDS4 363 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 GTF2H4Q92759 462 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 GGHQ92820 318 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 RPL3LQ92901 407 aaKnown RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 LHX4Q969G2 390 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CCDC124Q96CT7 223 aaKnown RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ECHDC3Q96DC8 303 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CCDC126Q96EE4 140 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 WDYHV1Q96HA8 205 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 SENP5Q96HI0 755 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 RBBP8Q99708 897 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 TIMP4Q99727 224 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 NRTNQ99748 197 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 THAP7Q9BT49 309 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 THTPAQ9BU02 230 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ELOVL1Q9BW60 279 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 PIGMQ9H3S5 423 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 Q9H521 79 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 CDCP1Q9H5V8 836 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 WDR55Q9H6Y2 383 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 NMRAL1Q9HBL8 299 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 EML4Q9HC35 981 aaKnown RBP4.48□□□□□ -1.69
PABPC1-223ENST00000523636 BPIFA1Q9NP55 256 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 SPHK1Q9NYA1 384 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 PLEK2Q9NYT0 353 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 SLC17A6Q9P2U8 582 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 SPATA2Q9UM82 520 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 ACOT9Q9Y305 439 aa4.48□□□□□ -1.69
PABPC1-223ENST00000523636 HSPG2P98160 4391 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 NCKAP5O14513 1909 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 IGHV4-30-2A0A087WSY4 118 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 A0A096LPK6 155 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 CXorf51AA0A1B0GTR3 108 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 OR6C68A6NDL8 312 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 EFCAB10A6NFE3 127 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 A8MUA0 341 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 SMLR1H3BR10 107 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 DLGAP1O14490 977 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 NME2P1O60361 137 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 LMX1BO60663 402 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 RAMP2O60895 175 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 SERPINB7O75635 380 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 PIAS1O75925 651 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 VAMP5O95183 116 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 C1QAP02745 245 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 SERPINA7P05543 415 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 IGHV4-31P0DP07 118 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 ST6GAL1P15907 406 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 RAB4AP20338 218 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 MPZP25189 248 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 GSTM2P28161 218 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 OR1E1P30953 314 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 RPL14P50914 215 aaKnown RBP4.47□□□□□ -1.69
PABPC1-223ENST00000523636 CCR8P51685 355 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 SLC37A1P57057 533 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 OR2B6P58173 313 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 AP3S2P59780 193 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 DCDP81605 110 aaKnown RBP4.47□□□□□ -1.69
PABPC1-223ENST00000523636 TXNL4AP83876 142 aaKnown RBP4.47□□□□□ -1.69
PABPC1-223ENST00000523636 TSPAN31Q12999 210 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 CYTH1Q15438 398 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 BRMS1LQ5PSV4 323 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 TCHHL1Q5QJ38 904 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-223ENST00000523636 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 GPRC6AQ5T6X5 926 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 ZNF691Q5VV52 312 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 AGAP6Q5VW22 663 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 KHDRBS2Q5VWX1 349 aaKnown RBP4.47□□□□□ -1.69
PABPC1-223ENST00000523636 TIGD3Q6B0B8 471 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 TMEM225Q6GV28 225 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 IDO2Q6ZQW0 420 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 PLEKHG7Q6ZR37 379 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 SLC22A16Q86VW1 577 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 C10orf107Q8IVU9 208 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 OR5D18Q8NGL1 313 aa4.47□□□□□ -1.69
PABPC1-223ENST00000523636 OR5M9Q8NGP3 310 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms