RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 SMIM11AP58511 58 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 TSPAN31Q12999 210 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 HNRNPA0Q13151 305 aaKnown RBP8.16□□□□□ -1.1
PABPC1-222ENST00000523555 CARTPTQ16568 116 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 TBC1D28Q2M2D7 210 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 MTX3Q5HYI7 312 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 CLEC12AQ5QGZ9 265 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 SPATA46Q5T0L3 261 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 GPR139Q6DWJ6 353 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 RGS7BPQ6MZT1 257 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-222ENST00000523555 LEG1Q6P5S2 330 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 PGM2L1Q6PCE3 622 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 TMEM179BQ7Z7N9 219 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 ICA1LQ8NDH6 482 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 SDR9C7Q8NEX9 313 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 OR4K13Q8NH42 304 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 FNDC8Q8TC99 324 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 GNPDA2Q8TDQ7 276 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 ZNRF4Q8WWF5 429 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 C11orf40Q8WZ69 217 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 SLC7A6Q92536 515 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 FAM168AQ92567 244 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 NMNAT3Q96T66 252 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 MUC13Q9H3R2 512 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 MAGIXQ9H6Y5 334 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 CDH20Q9HBT6 801 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 DYNLRB1Q9NP97 96 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 DUSP13Q9UII6 198 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 FBXL3Q9UKT7 428 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 TMCC3Q9ULS5 477 aa8.16□□□□□ -1.1
PABPC1-222ENST00000523555 IGLV3-9A0A075B6K5 115 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 IGLV1-36A0A0B4J1U3 117 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 IGHV4-61A0A0C4DH41 118 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR6C68A6NDL8 312 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 FAM171A2A8MVW0 826 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 HPXP02790 462 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 LCKP06239 509 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 GAAP10253 952 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 PSKH1P11801 424 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 BMP4P12644 408 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 NR2C1P13056 603 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 ZNF250P15622 560 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 SLC6A6P31641 620 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 RBMXP38159 391 aaKnown RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 MPV17P39210 176 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 MAGEB1P43366 347 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 PDLIM4P50479 330 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 RPS6KA3P51812 740 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 GLO1Q04760 184 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 PLP2Q04941 152 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 CCDC92Q53HC0 331 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 ELFN2Q5R3F8 820 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 SLC35F1Q5T1Q4 408 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR2T5Q6IEZ7 315 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 LYPD4Q6UWN0 246 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 DPPA2Q7Z7J5 298 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR6V1Q8N148 313 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 AQP11Q8NBQ7 271 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR1J1Q8NGS3 322 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR2T29Q8NH02 315 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 CANT1Q8WVQ1 401 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 NIPSNAP1Q9BPW8 284 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 SOX7Q9BT81 388 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 IFT27Q9BW83 186 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 CADM1Q9BY67 442 aaKnown RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 TRIM15Q9C019 465 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 KCNN2Q9H2S1 579 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 SRA1Q9HD15 236 aaKnown RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 KRCC1Q9NPI7 259 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-222ENST00000523555 TAAR3PQ9P1P4 343 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 B9D1Q9UPM9 204 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 SPEF1Q9Y4P9 236 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 FKBP7Q9Y680 259 aa8.15□□□□□ -1.1
PABPC1-222ENST00000523555 NAV3Q8IVL0 2385 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 A0A1W2PPW3 197 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 M0R233 179 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 BHLHE40O14503 412 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 ARPC3O15145 178 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 RER1O15258 196 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 GYG2O15488 501 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 SYNGR3O43761 229 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 AHCYL1O43865 530 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 DOK2O60496 412 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 ENTPD5O75356 428 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 KHDRBS3O75525 346 aaKnown RBP8.14□□□□□ -1.11
PABPC1-222ENST00000523555 KRT36O76013 467 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 CCNB2O95067 398 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 SOX14O95416 240 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 STAMBPO95630 424 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 PTHP01270 115 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 TFP02787 698 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 DBHP09172 617 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 RAP2AP10114 183 aa8.14□□□□□ -1.11
PABPC1-222ENST00000523555 APEHP13798 732 aaKnown RBP8.14□□□□□ -1.11
PABPC1-222ENST00000523555 DAOP14920 347 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms