RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TAS2R16Q9NYV7 291 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 TINAGQ9UJW2 476 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 CAB39Q9Y376 341 aaPredicted RBP11.5□□□□□ -0.57
CPNE3-205ENST00000522240 PHF3Q92576 2039 aaKnown RBP11.5□□□□□ -0.57
CPNE3-205ENST00000522240 A0A1W2PQL4 384 aaPredicted RBP11.49□□□□□ -0.57
CPNE3-205ENST00000522240 HSPB2A8KAH6 182 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 E9PLN8 166 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 TMCC2O75069 709 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 IL18BPO95998 194 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 PTHP01270 115 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 TFAP2AP05549 437 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 SPARCP09486 303 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 CD8BP10966 210 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ALOX5APP20292 161 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 CTSSP25774 331 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 MPGP29372 298 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 CA7P43166 264 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ALDH3B2P48448 385 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ETV1P50549 477 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 WNT4P56705 351 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF85Q03923 595 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 HSPB2Q16082 182 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 MEP1BQ16820 701 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 CDONQ4KMG0 1287 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 TMEM211Q6ICI0 200 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 SLC18B1Q6NT16 456 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 VWA1Q6PCB0 445 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 DPY19L4Q7Z388 723 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ATCAYQ86WG3 371 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 NANOGP1Q8N7R0 232 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ASB17Q8WXJ9 295 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 MUL1Q969V5 352 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 FOXN4Q96NZ1 517 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 WACQ9BTA9 647 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ALG8Q9BVK2 526 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
CPNE3-205ENST00000522240 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 PRSS50Q9UI38 385 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 LAMP5Q9UJQ1 280 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 PROCRQ9UNN8 238 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 COPS3Q9UNS2 423 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 POLR1DQ9Y2S0 133 aa11.49□□□□□ -0.57
CPNE3-205ENST00000522240 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF593O00488 134 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-205ENST00000522240 SIAH2O43255 324 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 MPZL1O95297 269 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 CGAP01215 116 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 PSKH1P11801 424 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 COX5AP20674 150 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 CDAP32320 146 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 MAP2K4P45985 399 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 RPL5P46777 297 aaKnown RBP11.48□□□□□ -0.57
CPNE3-205ENST00000522240 EGR3Q06889 387 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 FAPQ12884 760 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 FOXF2Q12947 444 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 AQP6Q13520 282 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 NEDD8Q15843 81 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 FAM27BQ5VT28 67 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 TMPRSS11AQ6ZMR5 421 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 C3P1Q6ZMU1 363 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 Q6ZT83 130 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 SYS1Q8N2H4 156 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 UBE2J2Q8N2K1 259 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF485Q8NCK3 441 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 NAXEQ8NCW5 288 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 RORBQ92753 470 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 STARD4Q96DR4 205 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF837Q96EG3 531 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-205ENST00000522240 DMRTA2Q96SC8 542 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 TBX5Q99593 518 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 SIAEQ9HAT2 523 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 ISYNA1Q9NPH2 558 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
CPNE3-205ENST00000522240 PRRC2CQ9Y520 2896 aaKnown RBP11.48□□□□□ -0.57
CPNE3-205ENST00000522240 NBASA2RRP1 2371 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 FARS2O95363 451 aaKnown RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SCG5P05408 212 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 CST2P09228 141 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 OPRM1P35372 400 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 BDH1Q02338 343 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ROM1Q03395 351 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ENDOGQ14249 297 aaKnown RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SPHARQ15513 63 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SGCAQ16586 387 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SYT6Q5T7P8 510 aaPredicted RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 KCTD18Q6PI47 426 aaPredicted RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF322Q6U7Q0 402 aaPredicted RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 PLEKHG7Q6ZR37 379 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SSX6Q7RTT6 188 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 BTLAQ7Z6A9 289 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SYT9Q86SS6 491 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 LHFPL3Q86UP9 236 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 SLC22A24Q8N4F4 322 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms