RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 DIMT1Q9UNQ2 313 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-227ENST00000521387 CARD8Q9Y2G2 431 aa6.33□□□□□ -1.4
CTNNA1-227ENST00000521387 MMP24Q9Y5R2 645 aa6.33□□□□□ -1.4
CTNNA1-227ENST00000521387 CLCA3PQ9Y6N3 262 aa6.33□□□□□ -1.4
CTNNA1-227ENST00000521387 CDH10Q9Y6N8 788 aa6.33□□□□□ -1.4
CTNNA1-227ENST00000521387 PLXNB1O43157 2135 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 HUWE1Q7Z6Z7 4374 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 LCE6AA0A183 80 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC22A31A6NKX4 558 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 CCRL2O00421 344 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ABCD4O14678 606 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SURF4O15260 269 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 PRODHO43272 600 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 FMO6PO60774 539 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 APOL3O95236 402 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 CLPSP04118 112 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 IGKV3-11P04433 115 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SCG5P05408 212 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 GUSBP08236 651 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 IFI30P13284 250 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 IL11P20809 199 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 OMGP23515 440 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 PTGDSP41222 190 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ACAA2P42765 397 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 CRYBB2P43320 205 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RFX3P48380 749 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 HSD17B7P56937 341 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RPS3AP61247 264 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 TUBA1BP68363 451 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 IFITM3Q01628 133 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SPOCK1Q08629 439 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 STX4Q12846 297 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ITGADQ13349 1161 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SPHARQ15513 63 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNHIT3Q15649 155 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF141Q15928 474 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 KLHL22Q53GT1 634 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 AADACL4Q5VUY2 407 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC30A6Q6NXT4 461 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 C16orf87Q6PH81 154 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF620Q6ZNG0 422 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 LINC00299Q6ZSB3 139 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 TUBA1AQ71U36 451 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SHFQ7M4L6 423 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 GLCCI1Q86VQ1 547 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RNF113BQ8IZP6 322 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 KIR3DL3Q8N743 410 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF615Q8N8J6 731 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 PROKR2Q8NFJ6 384 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 BBS1Q8NFJ9 593 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 OR14A16Q8NHC5 309 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 MCFD2Q8NI22 146 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM239Q8WW34 195 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 DAZLQ92904 295 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RIT1Q92963 219 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM186Q96B77 213 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RBM18Q96H35 190 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 VSTM2LQ96N03 204 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC38A2Q96QD8 506 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 CDADC1Q9BWV3 514 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 NXF2Q9GZY0 626 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 RACGAP1Q9H0H5 632 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 C20orf141Q9NUB4 165 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ERVK-19Q9WJR5 959 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 ERGIC3Q9Y282 383 aa6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 MRPS33Q9Y291 106 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-227ENST00000521387 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 WNK2Q9Y3S1 2297 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 A0A1B0GWA3 101 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 C17orf105B2RV13 164 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 B4DSR2 109 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 B4DXG7 233 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 PTP4A3O75365 173 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SULT1C4O75897 302 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 IFNA16P05015 189 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 HMGN1P05114 100 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 LIMS3P0CW19 117 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 LIMS4P0CW20 117 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 GIFP27352 417 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CALRP27797 417 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC6A8P48029 635 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 ATP12AP54707 1039 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC37A1P57057 533 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 B3GALT5-AS1P59052 145 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SKP1P63208 163 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 MLLT11Q13015 90 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 TMED1Q13445 227 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 FGFBP1Q14512 234 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 NDUFAF6Q330K2 333 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms