RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 A6NDN8 102 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 GABRR3A8MPY1 467 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 BCKDKO14874 412 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF861PO60384 105 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 SUPT3HO75486 399 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 LSM8O95777 96 aaKnown RBP3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 SNAI1O95863 264 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 HBE1P02100 147 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 IFNW1P05000 195 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 ARG1P05089 322 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 RETP07949 1114 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 CLTAP09496 248 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 CNR1P21554 472 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 CPN2P22792 545 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 NMUP48645 174 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 IFT88Q13099 833 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 DNAJC3Q13217 504 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 PSG5Q15238 335 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 THEM4Q5T1C6 240 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 LYPD2Q6UXB3 125 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF493Q6ZR52 646 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 STRADAQ7RTN6 431 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 RNF175Q8N4F7 328 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 PROKR2Q8NFJ6 384 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 DNAJC19Q96DA6 116 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 PIGUQ9H490 435 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 DMAP1Q9NPF5 467 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 CD84Q9UIB8 345 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 ST3GAL6Q9Y274 331 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 RHBDD3Q9Y3P4 386 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 NFASCO94856 1347 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF701M0R085 212 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 LAD1O00515 517 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 KMOO15229 486 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 RAD51CO43502 376 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 CRYGCP07315 174 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 RAB3BP20337 219 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 TUBG1P23258 451 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 SLC7A9P82251 487 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 GGTLC2Q14390 218 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 QPRTQ15274 297 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 MPPED2Q15777 294 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 TMEM183AQ8IXX5 376 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 STPG2Q8N412 459 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 INO80EQ8NBZ0 244 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR51G1Q8NGK1 321 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 NAT6Q93015 286 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 EEF1AKMT3Q96AZ1 226 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 CREB3L1Q96BA8 519 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF707Q96C28 371 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 CERS2Q96G23 380 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 MICU1Q9BPX6 476 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 TMEM38AQ9H6F2 299 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 ASB8Q9H765 288 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 TUBG2Q9NRH3 451 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 ABCB10Q9NRK6 738 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 DEC1Q9P2X7 70 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 RPS6KB2Q9UBS0 482 aa3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 RCL1Q9Y2P8 373 aaKnown RBP3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 MRPS18BQ9Y676 258 aaKnown RBP3.59□□□□□ -1.83
HMGB1P46-201ENST00000520062 IGHV3-64DA0A0J9YX35 117 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 A0A1B0GW55 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 TSPAN11A1L157 253 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 K7EMT4 169 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZBTB5O15062 677 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 CHMP2AO43633 222 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 IGLV2-23P01705 113 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DCNP07585 359 aaKnown RBP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 UBTFL6P0CB48 400 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L2P0CJ85 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L3P0CJ86 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L4P0CJ87 422 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L5P0CJ88 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L6P0CJ89 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L7P0CJ90 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR5H8P0DN80 308 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 U2AF2P26368 475 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 LONP1P36776 959 aaKnown RBP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4L9Q6RFH8 374 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 FAM122BQ7Z309 247 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF429Q86V71 674 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 CMTM8Q8IZV2 173 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 LRRC75AQ8NAA5 344 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 TMEM230Q96A57 120 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 GALNT14Q96FL9 552 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 WFIKKN1Q96NZ8 548 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 CSPG4P5Q96PW8 444 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 MYOZ2Q9NPC6 264 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZC4H2Q9NQZ6 224 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 DUX4Q9UBX2 424 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF282Q9UDV7 671 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 CACNG2Q9Y698 323 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 UBN2Q6ZU65 1347 aa3.58□□□□□ -1.84
HMGB1P46-201ENST00000520062 A0A0J9YYE9 177 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 A8MU10 97 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 SERPINE3A8MV23 424 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms