RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 IRF4Q15306 451 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 RGNQ15493 299 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 DNAJC24Q6P3W2 148 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
NPM1-206ENST00000519955 NTM-AS1Q6ZSK4 140 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 FAM43BQ6ZT52 329 aaPredicted RBP3.05□□□□□ -1.92
NPM1-206ENST00000519955 CDH26Q8IXH8 852 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 OR2A1Q8NGT9 310 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 DEDD2Q8WXF8 326 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 KIFAP3Q92845 792 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 GALNT14Q96FL9 552 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 SLC29A1Q99808 456 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 NUP58Q9BVL2 599 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 SCRT1Q9BWW7 348 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 SAV1Q9H4B6 383 aaPredicted RBP3.05□□□□□ -1.92
NPM1-206ENST00000519955 SIRT7Q9NRC8 400 aa3.05□□□□□ -1.92
NPM1-206ENST00000519955 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 GOLGA8OA6NCC3 632 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 GOLGA8NF8WBI6 632 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 CLOCKO15516 846 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 RBFOX2O43251 390 aaKnown RBP eCLIP3.04□□□□□ -1.924e-6■■■■□ 21.2
NPM1-206ENST00000519955 SERPINA5P05154 406 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 ANXA5P08758 320 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 OR5H8P0DN80 308 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 NPY1RP25929 384 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 PBLDP30039 288 aaPredicted RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 GPX4P36969 197 aaPredicted RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 CDH6P55285 790 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 LOXL1Q08397 574 aaPredicted RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 SF3A2Q15428 464 aaKnown RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 FAM78AQ5JUQ0 283 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 C9orf135Q5VTT2 229 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 RAET1LQ5VY80 246 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 BHLHA15Q7RTS1 189 aaPredicted RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 WDR86Q86TI4 376 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 RAB3IL1Q8TBN0 382 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 NTAN1Q96AB6 310 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 DNAJC1Q96KC8 554 aaKnown RBP3.04□□□□□ -1.92
NPM1-206ENST00000519955 LINC00477Q96M19 166 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 ZNF382Q96SR6 550 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 LZTS2Q9BRK4 669 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 OR51M1Q9H341 326 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 GPATCH2LQ9NWQ4 482 aa3.04□□□□□ -1.92
NPM1-206ENST00000519955 GPATCH8Q9UKJ3 1502 aaKnown RBP3.03□□□□□ -1.92
NPM1-206ENST00000519955 RAD51BO15315 384 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 KLHL41O60662 606 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 ADRA2AP08913 450 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 UBTFL6P0CB48 400 aaPredicted RBP3.03□□□□□ -1.92
NPM1-206ENST00000519955 ZNF286BP0CG31 522 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 DCKP27707 260 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 GDI1P31150 447 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 RRM2P31350 389 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 QPRTQ15274 297 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 FBXW12Q6X9E4 464 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
NPM1-206ENST00000519955 OR5B3Q8NH48 314 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 ACMSDQ8TDX5 336 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 ELMO1Q92556 727 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 MRGPRFQ96AM1 343 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 DUS3LQ96G46 650 aaKnown RBP3.03□□□□□ -1.92
NPM1-206ENST00000519955 DDX19AQ9NUU7 478 aaKnown RBP3.03□□□□□ -1.92
NPM1-206ENST00000519955 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 ZNF835Q9Y2P0 537 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 RFNGQ9Y644 331 aa3.03□□□□□ -1.92
NPM1-206ENST00000519955 ADAMTS13Q76LX8 1427 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.02□□□□□ -1.93
NPM1-206ENST00000519955 SERPINE3A8MV23 424 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 C9JVG2 144 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 RNF13O43567 381 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 TCN2P20062 427 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 SLC1A1P43005 524 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 CX3CR1P49238 355 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 CSNK1EP49674 416 aaKnown RBP3.02□□□□□ -1.93
NPM1-206ENST00000519955 VSX2P58304 361 aaPredicted RBP3.02□□□□□ -1.93
NPM1-206ENST00000519955 OR7A5Q15622 319 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ZNF684Q5T5D7 378 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ARMC12Q5T9G4 340 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 METTL21CQ5VZV1 264 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 PLET1Q6UQ28 207 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ZYG11AQ6WRX3 759 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 TMEM150AQ86TG1 271 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 IQCKQ8N0W5 287 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ARRDC1Q8N5I2 433 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ZNF615Q8N8J6 731 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 PRELID2Q8N945 189 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 COQ8AQ8NI60 647 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 ZNF461Q8TAF7 563 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 C15orf40Q8WUR7 153 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 RGP1Q92546 391 aaPredicted RBP3.02□□□□□ -1.93
NPM1-206ENST00000519955 SLC38A4Q969I6 547 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 NARS2Q96I59 477 aaKnown RBP3.02□□□□□ -1.93
NPM1-206ENST00000519955 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 CCDC77Q9BR77 488 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 HRASLS2Q9NWW9 162 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 PLA2R1Q13018 1463 aa3.02□□□□□ -1.93
NPM1-206ENST00000519955 TRBV11-1A0A0K0K1C0 115 aa3.01□□□□□ -1.93
NPM1-206ENST00000519955 LYRM9A8MSI8 78 aa3.01□□□□□ -1.93
NPM1-206ENST00000519955 SIRPB1O00241 398 aa3.01□□□□□ -1.93
NPM1-206ENST00000519955 NUPL2O15504 423 aaKnown RBP3.01□□□□□ -1.93
NPM1-206ENST00000519955 OR2J3O76001 311 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms