RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLC16A9Q7RTY1 509 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 OR6N2Q8NGY6 317 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 OR2AJ1Q8NGZ0 328 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 C11orf40Q8WZ69 217 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 FOXN4Q96NZ1 517 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 YIPF3Q9GZM5 350 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 MARCH7Q9H992 704 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 SCN3BQ9NY72 215 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 HCFC1P51610 2035 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 ARPC4-TTLL3A0A0A6YYG9 625 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 EFCAB10A6NFE3 127 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 TVP23AA6NH52 213 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 FAM20BO75063 409 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 TFP02787 698 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 SPARCP09486 303 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 DBTP11182 482 aaKnown RBP12.38□□□□□ -0.43
SDC2-203ENST00000519587 CCKARP32238 428 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 ARR3P36575 388 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 NAA10P41227 235 aaPredicted RBP12.38□□□□□ -0.43
SDC2-203ENST00000519587 CXCR4P61073 352 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 ACTC1P68032 377 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 ACTA1P68133 377 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 FAM27E3Q08E93 113 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 MEP1BQ16820 701 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 TEX30Q5JUR7 227 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 SYT9Q86SS6 491 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 LRRC18Q8N456 261 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 OR51G2Q8NGK0 314 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 S100PBPQ96BU1 408 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 RNFT2Q96EX2 444 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
SDC2-203ENST00000519587 MNTQ99583 582 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 SH3GL3Q99963 347 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 MRPL22Q9NWU5 206 aaKnown RBP12.38□□□□□ -0.43
SDC2-203ENST00000519587 NDRG3Q9UGV2 375 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 TMEM14AQ9Y6G1 99 aa12.38□□□□□ -0.43
SDC2-203ENST00000519587 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 SLC1A7O00341 560 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 PHYHO14832 338 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 MPZL1O95297 269 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 RAB36O95755 333 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 FADS2O95864 444 aaKnown RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 GPANK1O95872 356 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 MRPL3P09001 348 aaKnown RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 CD79AP11912 226 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 RAB40BQ12829 278 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 TSC22D1Q15714 1073 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 C6orf141Q5SZD1 244 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 SLC18B1Q6NT16 456 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 TIGD4Q8IY51 512 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 ZNF786Q8N393 782 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 ZNRF4Q8WWF5 429 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 HSD17B8Q92506 261 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 MRPL48Q96GC5 212 aaKnown RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 MED18Q9BUE0 208 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 RNF121Q9H920 327 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 WDR76Q9H967 626 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 ADGRL4Q9HBW9 690 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 PLCXD1Q9NUJ7 323 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 CNOT2Q9NZN8 540 aaKnown RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 ASH2LQ9UBL3 628 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 AASSQ9UDR5 926 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 TPRKBQ9Y3C4 175 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 LRRC42Q9Y546 428 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
SDC2-203ENST00000519587 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
SDC2-203ENST00000519587 ITPR2Q14571 2701 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SELENOFO60613 162 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 PTHP01270 115 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 HLA-HP01893 362 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SBK2P0C263 348 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 CCDC159P0C7I6 412 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
SDC2-203ENST00000519587 PLP2Q04941 152 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 TFF3Q07654 80 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
SDC2-203ENST00000519587 PPA1Q15181 289 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 CDSNQ15517 529 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
SDC2-203ENST00000519587 PCK2Q16822 640 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 GSG1Q2KHT4 349 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
SDC2-203ENST00000519587 LYPD4Q6UWN0 246 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms