RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CMAHPQ9Y471 501 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ZNHIT1O43257 154 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
CLN8-204ENST00000519254 ZFPL1O95159 310 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 SERPINA3P01011 423 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 SPARCP09486 303 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 PGA4P0DJD7 388 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 PGA3P0DJD8 388 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 ZNF12P17014 697 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 ZNF708P17019 499 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 ENPP1P22413 925 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 CAMK2DQ13557 499 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 OR6X1Q8NH79 312 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 ASB17Q8WXJ9 295 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
CLN8-204ENST00000519254 AP3S1Q92572 193 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 SLC25A44Q96H78 314 aaPredicted RBP12.85□□□□□ -0.35
CLN8-204ENST00000519254 ADGRG7Q96K78 797 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 CEP19Q96LK0 163 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 OR8B4Q96RC9 309 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 PRORYQ9H606 182 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
CLN8-204ENST00000519254 A0A1B0GTH9 108 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ACTL6AO96019 429 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 UCHL1P09936 223 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ZNF43P17038 809 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 ALKBH1Q13686 389 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 PCK2Q16822 640 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 PDSS1Q5T2R2 415 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 Q6ZNX1 250 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 HAVCR2Q8TDQ0 301 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 PNPLA2Q96AD5 504 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 RBP7Q96R05 134 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 RASD1Q9Y272 281 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ZNF281Q9Y2X9 895 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 A0A0G2JK05 382 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 HSPB2A8KAH6 182 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 EIF1BO60739 113 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 UPK1BO75841 260 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 GATBO75879 557 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 WNT11O96014 354 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 IGHG1P01857 330 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 IGHG3P01860 377 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 RAC3P60763 192 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ROM1Q03395 351 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 EIF2B1Q14232 305 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 HSPB2Q16082 182 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 TEX30Q5JUR7 227 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 THEM4Q5T1C6 240 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 RPUSD3Q6P087 351 aaKnown RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 FAM180AQ6UWF9 173 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 PLXDC2Q6UX71 529 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 PAMR1Q6UXH9 720 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 LRRN1Q6UXK5 716 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 SIAH3Q8IW03 269 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 NOXO1Q8NFA2 376 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 OR2G2Q8NGZ5 317 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 NSMAFQ92636 917 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ABHD6Q9BV23 337 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 ELOVL3Q9HB03 270 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 TIGARQ9NQ88 270 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 TUBD1Q9UJT1 453 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 CAMK2AQ9UQM7 478 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 V9GYH0 126 aa12.84□□□□□ -0.35
CLN8-204ENST00000519254 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
CLN8-204ENST00000519254 ZNF407Q9C0G0 2248 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 OR4C45A6NMZ5 311 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
CLN8-204ENST00000519254 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
CLN8-204ENST00000519254 HRGP04196 525 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 MYL9P24844 172 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 AGFG1P52594 562 aaKnown RBP12.83□□□□□ -0.36
CLN8-204ENST00000519254 OR10A3P58181 314 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 CLRN1P58418 232 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 RGS21Q2M5E4 152 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 YIF1BQ5BJH7 314 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 DDI2Q5TDH0 399 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 DCDC5Q6ZRR9 648 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 HDDC2Q7Z4H3 204 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 GLB1L2Q8IW92 636 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
CLN8-204ENST00000519254 NPIPA2E9PIF3 369 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms