RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PLP2Q04941 152 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 BNIP1Q12981 228 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 FAM98BQ52LJ0 330 aaKnown RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SPATA46Q5T0L3 261 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 LEG1Q6P5S2 330 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 DPPA2Q7Z7J5 298 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 ICA1LQ8NDH6 482 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SDR9C7Q8NEX9 313 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 FNDC8Q8TC99 324 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 ZNRF4Q8WWF5 429 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SLC7A6Q92536 515 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 LRGUKQ96M69 825 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 IFT27Q9BW83 186 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 CHID1Q9BWS9 393 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 TRIM15Q9C019 465 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 KCNN2Q9H2S1 579 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SRA1Q9HD15 236 aaKnown RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 KRCC1Q9NPI7 259 aaPredicted RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 DUSP13Q9UII6 198 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 FBXL3Q9UKT7 428 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
VEGFA-219ENST00000518824 C2CD3Q4AC94 2353 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 IGLV1-36A0A0B4J1U3 117 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 C5orf49A4QMS7 147 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 OR6C68A6NDL8 312 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 BHLHE40O14503 412 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 ARPC3O15145 178 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 GSC2O15499 205 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 ENTPD5O75356 428 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 KHDRBS3O75525 346 aaKnown RBP11.41□□□□□ -0.58
VEGFA-219ENST00000518824 CCNB2O95067 398 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 SOX14O95416 240 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 SNAP29O95721 258 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 NGFP01138 241 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 LCKP06239 509 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 RAP2AP10114 183 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 GAAP10253 952 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 NAT2P11245 290 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 APEHP13798 732 aaKnown RBP11.41□□□□□ -0.58
VEGFA-219ENST00000518824 APLNRP35414 380 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 MPV17P39210 176 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 HNRNPA0Q13151 305 aaKnown RBP11.41□□□□□ -0.58
VEGFA-219ENST00000518824 CARTPTQ16568 116 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF362Q5T0B9 420 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-219ENST00000518824 RGS7BPQ6MZT1 257 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-219ENST00000518824 CLEC2AQ6UVW9 174 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 RFPL4BQ6ZWI9 263 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 HS3ST5Q8IZT8 346 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 NPEPL1Q8NDH3 523 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 OR4Q3Q8NH05 313 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 FAM168AQ92567 244 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 SLCO4A1Q96BD0 722 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 DDOQ99489 341 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 NIPSNAP1Q9BPW8 284 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 RHNO1Q9BSD3 238 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 POFUT1Q9H488 388 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 DYNLRB1Q9NP97 96 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 B9D1Q9UPM9 204 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 POMPQ9Y244 141 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 SPEF1Q9Y4P9 236 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 TIMM10BQ9Y5J6 103 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 CDH10Q9Y6N8 788 aa11.41□□□□□ -0.58
VEGFA-219ENST00000518824 ABCA1O95477 2261 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 DHRS12A0PJE2 317 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 AQP12BA6NM10 295 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 VWC2LB2RUY7 222 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 AHCYL1O43865 530 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 DNAJC8O75937 253 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-219ENST00000518824 NCR1O76036 304 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 PSKH1P11801 424 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 BMP4P12644 408 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 RBMXP38159 391 aaKnown RBP11.4□□□□□ -0.58
VEGFA-219ENST00000518824 IFNGR2P38484 337 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 CENPAP49450 140 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 GLO1Q04760 184 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 MICAQ29983 383 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 DNAL1Q4LDG9 190 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 CCDC92Q53HC0 331 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-219ENST00000518824 CORO6Q6QEF8 472 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 LYPD4Q6UWN0 246 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 VASH1Q7L8A9 365 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-219ENST00000518824 ADCK1Q86TW2 530 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 SPATA24Q86W54 205 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 GLB1L2Q8IW92 636 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 AQP12AQ8IXF9 295 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 OR52E2Q8NGJ4 325 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 OR1J1Q8NGS3 322 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 NDEL1Q9GZM8 345 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 REEP1Q9H902 201 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.58
VEGFA-219ENST00000518824 ARMC1Q9NVT9 282 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 IL20Q9NYY1 176 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 ASH2LQ9UBL3 628 aa11.4□□□□□ -0.58
VEGFA-219ENST00000518824 REV1Q9UBZ9 1251 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms