RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GPR87Q9BY21 358 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2J1Q9GZK6 312 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC25A31Q9H0C2 315 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAGT1Q9H0U3 335 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10A5Q9H207 317 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDCP1Q9H5V8 836 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 FN3KRPQ9HA64 309 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZCCHC3Q9NUD5 404 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM260Q9NX78 707 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 P4HTMQ9NXG6 502 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 FLRT1Q9NZU1 646 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTGFRNQ9P2B2 879 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KCNG2Q9UJ96 466 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 GJD2Q9UKL4 321 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 IKZF2Q9UKS7 526 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 GABRQQ9UN88 632 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPIPA1Q9UND3 350 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC22A13Q9Y226 551 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM56-RWDD3S4R434 201 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PHIPQ8WWQ0 1821 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TNS2Q63HR2 1409 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 DOT1LQ8TEK3 1739 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 hCG_1809904A0A1W2PP81 198 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 A0A1W2PR64 198 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 A0A1W2PRV1 198 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GXYLT2A0PJZ3 443 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GABRR3A8MPY1 467 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 E7EQ34 232 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PROB1E7EW31 1015 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SULT2B1O00204 365 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GOSR2O14653 212 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARPC1BO15143 372 aaKnown RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BKO60814 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAMP3O60896 148 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 MTX2O75431 263 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 MMP23AO75900 390 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARL6IP5O75915 188 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF432O94892 652 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL18BPO95998 194 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACTL6AO96019 429 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HPRT1P00492 218 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 IGHEP01854 428 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GBAP04062 536 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATP1B1P05026 303 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ICAM1P05362 532 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 BCHEP06276 602 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BJP06899 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 DCNP07585 359 aaKnown RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADRA2AP08913 450 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSF1P09603 554 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELFN1P0C7U0 828 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 EBLN1P0CF75 366 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PET100P0DJ07 73 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TDGF1P13385 188 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OSMP13725 252 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACHEP22303 614 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BOP23527 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CYP2F1P24903 491 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SHC1P29353 583 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HOXA13P31271 388 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 S100A3P33764 101 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BBP33778 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHI3L1P36222 383 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 DLSTP36957 453 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GRK6P43250 576 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 JAK3P52333 1124 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 DIO3P55073 304 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDKN2DP55273 166 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SOX10P56693 466 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC37A1P57057 533 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BDP58876 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OSTNP61366 133 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ST8SIA6P61647 398 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BCP62807 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35A1P78382 337 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OC90Q02509 493 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBPJQ06330 500 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PMPCAQ10713 525 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF460Q14592 562 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 EBPQ15125 230 aaKnown RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZBTB6Q15916 424 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST2H2BEQ16778 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM183BQ1AE95 376 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 C5orf64Q2M2E5 130 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM177Q53S58 311 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 AWAT1Q58HT5 328 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM102BQ5T8I3 360 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 C1orf189Q5VU69 101 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CST9Q5W186 159 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TXNRD3NBQ6F5E7 133 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIAA0930Q6ICG6 404 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR6B2Q6IFH4 312 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ANKRD16Q6P6B7 361 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms