RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 H0YHG0 523 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 H7C1H1 209 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CLDN34H7C241 214 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 DFFAO00273 331 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CDX4O14627 284 aaPredicted RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ERI3O43414 337 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RAD51CO43502 376 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 LMX1BO60663 402 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ALOX12BO75342 701 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RBBP9O75884 186 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR5F1O95221 314 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RAB3DO95716 219 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TIMP1P01033 207 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SNRPCP09234 159 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SLC35E2P0CK97 266 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGKV1-13P0DP09 117 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CALM1P0DP23 149 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CALM2P0DP24 149 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CALM3P0DP25 149 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CDK4P11802 303 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GNB3P16520 340 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGFBP3P17936 291 aaPredicted RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TBPP20226 339 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RAB4AP20338 218 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGHV1-2P23083 117 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PCK1P35558 622 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TIMP3P35625 211 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GPX4P36969 197 aaPredicted RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GDF5P43026 501 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 BTDP43251 543 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GPR6P46095 362 aaPredicted RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR10A3P58181 314 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PRPS1P60891 318 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TSPAN5P62079 268 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CYCSP99999 105 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TGFBR3Q03167 851 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PRKCDQ05655 676 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FADDQ13158 208 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 UNC119Q13432 240 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ARL6IP1Q15041 203 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TWIST1Q15672 202 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SLC1A5Q15758 541 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 KLF17Q5JT82 389 aaPredicted RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 THEM4Q5T1C6 240 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CPTPQ5TA50 214 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 LEMD1Q68G75 181 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C8orf74Q6P047 294 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SPSB3Q6PJ21 355 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C9orf47Q6ZRZ4 202 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SSX6Q7RTT6 188 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FAM19A1Q7Z5A9 133 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 THOC6Q86W42 341 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 HORMAD1Q86X24 394 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ZFAND4Q86XD8 727 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ATPAF2Q8N5M1 289 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ZNF738Q8NE65 137 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR6K6Q8NGW6 343 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR51E1Q8TCB6 317 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 MRAPQ8TCY5 172 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TFB1MQ8WVM0 346 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FLYWCH2Q96CP2 140 aaKnown RBP2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 WDR34Q96EX3 536 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ZNF778Q96MU6 729 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 AGMATQ9BSE5 352 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TRIM51Q9BSJ1 452 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SRXN1Q9BYN0 137 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ELOVL4Q9GZR5 314 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TUBB1Q9H4B7 451 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 AMBNQ9NP70 447 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FBXO8Q9NRD0 319 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C1orf109Q9NX04 203 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CALYQ9NYX4 217 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TREM2Q9NZC2 230 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CACNG5Q9UF02 275 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ST3GAL6Q9Y274 331 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 UBIAD1Q9Y5Z9 338 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 V9GY05 133 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ABCB11O95342 1321 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RLFQ13129 1914 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 WDR81Q562E7 1941 aa2.13□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGLV4-3A0A075B6K6 122 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGHV3-16A0A0C4DH30 117 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ANKRD20A5PA0PJZ0 165 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TMEM210A6NLX4 147 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GOLGA8JA6NMD2 632 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C12orf77C9JDV5 145 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GOLGA8KD6RF30 607 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 E9PAM4 449 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GOLGA8MH3BSY2 632 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 H7C0C1 242 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 K7N7A8 449 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 NTN3O00634 580 aaPredicted RBP2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GPR171O14626 319 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 MGRN1O60291 552 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SLC16A7O60669 478 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 VAMP5O95183 116 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 VENTXO95231 258 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 LYPLA2O95372 231 aa2.12□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GJB5O95377 273 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms