RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SLC38A10Q9HBR0 1119 aa0.92□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TRMT112Q9UI30 125 aaKnown RBP0.92□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TENM1Q9UKZ4 2725 aa0.92□□□□□ -2.26
RNU6-1088P-201ENST00000516850 SVILO95425 2214 aa0.92□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TRAV19A0A0A6YYK7 116 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 MBLAC1A4D2B0 266 aaPredicted RBP0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 FCMRO60667 390 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 REM1O75628 298 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 DIRAS3O95661 229 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TCP1P17987 556 aaKnown RBP0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 EPS15P42566 896 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 KRTAP12-1P59990 96 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TWF1Q12792 350 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 PGGHGQ32M88 737 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 SLC36A3Q495N2 470 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 CCDC184Q52MB2 194 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 TTC23Q5W5X9 447 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 OR4F3Q6IEY1 312 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 FBXW12Q6X9E4 464 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 SGPP2Q8IWX5 399 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 OR6N1Q8NGY5 312 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 CMTM2Q8TAZ6 248 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 SEH1LQ96EE3 360 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 WDR34Q96EX3 536 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 PPA2Q9H2U2 334 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 NIPAL2Q9H841 368 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 RAB18Q9NP72 206 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 POLE4Q9NR33 117 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 C21orf62Q9NYP8 219 aa0.91□□□□□ -2.26
RNU6-1088P-201ENST00000516850 F6UB75 175 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SOX15O60248 233 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CD1CP29017 333 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SYKP43405 635 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CCNG1P51959 295 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FBXW4P57775 412 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 VSX2P58304 361 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ECH1Q13011 328 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MRPL28Q13084 256 aaKnown RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 BIKQ13323 160 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 AVPI1Q5T686 147 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 C16orf47Q6ZP98 133 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 LRRC74BQ6ZQY2 392 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 OR10J6PQ8NGY7 276 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 THUMPD2Q9BTF0 503 aaKnown RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FGF23Q9GZV9 251 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 AZI2Q9H6S1 392 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 KCNJ16Q9NPI9 418 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ACTR3BQ9P1U1 418 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TSSC4Q9Y5U2 329 aaPredicted RBP0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ATP10AO60312 1499 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CAMTA1Q9Y6Y1 1673 aa0.9□□□□□ -2.27
RNU6-1088P-201ENST00000516850 COL22A1Q8NFW1 1626 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MFNGO00587 321 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ARPC3O15145 178 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EIF1BO60739 113 aaKnown RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CLDN9O95484 217 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 UGT2B4P06133 528 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PFN1P07737 140 aaKnown RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 NCF1P14598 390 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 F2RP25116 425 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MPV17P39210 176 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EIF1P41567 113 aaKnown RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IDH2P48735 452 aaKnown RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IRX3P78415 501 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MAD2L1BPQ15013 274 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PDK4Q16654 411 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 YIF1BQ5BJH7 314 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RNASE13Q5GAN3 156 aaKnown RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TCEAL5Q5H9L2 206 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ENPP6Q6UWR7 440 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZNF619Q8N2I2 560 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 OR10R2Q8NGX6 335 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 HGDQ93099 445 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TCEAL3Q969E4 200 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MRGPRFQ96AM1 343 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IFT74Q96LB3 600 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RPRD1AQ96P16 312 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 COPS8Q99627 209 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TPPP3Q9BW30 176 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 COQ10BQ9H8M1 238 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 C8orf17Q9NRJ1 99 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SMOXQ9NWM0 555 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TAS2R1Q9NYW7 299 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CHRNA9Q9UGM1 479 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ATP8B3O60423 1300 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CACNA1DQ01668 2161 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PRR14LQ5THK1 2151 aa0.89□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGHV7-4-1A0A0J9YVY3 117 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CEACAM18A8MTB9 384 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GPR89AB7ZAQ6 455 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 C4orf51C9J302 202 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 E7EQL1 145 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CNMDO75829 334 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SLC22A5O76082 557 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGLV3-25P01717 112 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CD3GP09693 182 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GPR89BP0CG08 455 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 HRES1P13985 223 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RPA2P15927 270 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms