RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ZNF396Q96N95 335 aaPredicted RBP3.18□□□□□ -1.9
GYPB-214ENST00000513557 CSPG4P5Q96PW8 444 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 PLA2G2FQ9BZM2 168 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 RAB1BQ9H0U4 201 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 IKZF5Q9H5V7 419 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 INPP5EQ9NRR6 644 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.18□□□□□ -1.93e-6■■□□□ 13.8
GYPB-214ENST00000513557 ELOVL2Q9NXB9 296 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 COPS3Q9UNS2 423 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 SAR1BQ9Y6B6 198 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 STYXL1Q9Y6J8 313 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 SPTBN4Q9H254 2564 aa3.18□□□□□ -1.9
GYPB-214ENST00000513557 TRAV6A0A075B6T7 132 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 IGKV3D-15A0A087WSY6 115 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 TRBV9A0A0B4J1U6 114 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 IQANK1A0A1B0GTG1 560 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 E7ESA3 106 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 M0R3G1 203 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 DYNC1I1O14576 645 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CHST1O43916 411 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CXCL13O43927 109 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CBR3O75828 277 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 RENP00797 406 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 IGHV3-13P01766 116 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 ZNF883P0CG24 379 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CXCL8P10145 99 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 IGFBP5P24593 272 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CCNE1P24864 410 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CD82P27701 267 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 HMGCLP35914 325 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 NAA10P41227 235 aaPredicted RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 TNFSF9P41273 254 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 NPBWR2P48146 333 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 ACOT2P49753 483 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CSRP3P50461 194 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 PSMD4P55036 377 aaKnown RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 HTR4Q13639 388 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 GNMTQ14749 295 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 EIPR1Q53HC9 387 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 SDHAF4Q5VUM1 108 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 REEP3Q6NUK4 255 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 C19orf35Q6ZS72 473 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 FRA10AC1Q70Z53 315 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 SLC47A2Q86VL8 602 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 NUDCD3Q8IVD9 361 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 GPR65Q8IYL9 337 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 BPIFB2Q8N4F0 458 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 JAGN1Q8N5M9 183 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 DNAAF3Q8N9W5 541 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 INO80EQ8NBZ0 244 aaPredicted RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 FBXO36Q8NEA4 188 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 TCTEX1D2Q8WW35 142 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 ITLN1Q8WWA0 313 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 PIH1D2Q8WWB5 315 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 KIFAP3Q92845 792 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 NAT6Q93015 286 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 CCDC124Q96CT7 223 aaKnown RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 XPO6Q96QU8 1125 aaKnown RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 RHBGQ9H310 441 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 TMEM165Q9HC07 324 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 MEPEQ9NQ76 525 aaPredicted RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 TIGARQ9NQ88 270 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 ZC4H2Q9NQZ6 224 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 RAB23Q9ULC3 237 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 TMCO1Q9UM00 188 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 PRSS21Q9Y6M0 314 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 USP34Q70CQ2 3546 aa3.17□□□□□ -1.9
GYPB-214ENST00000513557 RIF1Q5UIP0 2472 aaKnown RBP3.17□□□□□ -1.9
GYPB-214ENST00000513557 MYO15AQ9UKN7 3530 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 ZNF318Q5VUA4 2279 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 DMDP11532 3685 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 GOLGA8QA0A0J9YX86 632 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 A0A1W2PPR1 153 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 GOLGA8IPA6NC78 632 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 GOLGA8JA6NMD2 632 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 EIF3HO15372 352 aaKnown RBP eCLIP3.16□□□□□ -1.9
GYPB-214ENST00000513557 OR10H3O60404 316 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 GALR3O60755 368 aaPredicted RBP3.16□□□□□ -1.9
GYPB-214ENST00000513557 SH3BGRLO75368 114 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 CCNB2O95067 398 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 SMC2O95347 1197 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 LYPLA2O95372 231 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 HPP00738 406 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 HOXD4P09016 255 aaPredicted RBP3.16□□□□□ -1.9
GYPB-214ENST00000513557 COX5AP20674 150 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 SERPINA2P20848 420 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 BCKDHBP21953 392 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 GABRR2P28476 465 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 LCN1P31025 176 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 ACVR1BP36896 505 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 VHLP40337 213 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 NBL1P41271 181 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 CCR2P41597 374 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 ELK3P41970 407 aa3.16□□□□□ -1.9
GYPB-214ENST00000513557 SLC1A1P43005 524 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms