RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ARHGDIAP52565 204 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 TUSC1Q2TAM9 212 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 ALKBH6Q3KRA9 238 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 ANKDD1AQ495B1 522 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 RBMS3Q6XE24 437 aaKnown RBP10.67□□□□□ -0.7
VEGFA-216ENST00000512683 SYT14Q8NB59 555 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 MOSPD2Q8NHP6 518 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 KLF14Q8TD94 323 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-216ENST00000512683 ST7LQ8TDW4 575 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 CCL17Q92583 94 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 POP5Q969H6 163 aaKnown RBP10.67□□□□□ -0.7
VEGFA-216ENST00000512683 NMD3Q96D46 503 aaKnown RBP10.67□□□□□ -0.7
VEGFA-216ENST00000512683 TPD52L3Q96J77 140 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 TSPAN32Q96QS1 320 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 TXNIPQ9H3M7 391 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 MED4Q9NPJ6 270 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 SNX13Q9Y5W8 968 aa10.67□□□□□ -0.7
VEGFA-216ENST00000512683 NME4O00746 187 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 FFAR1O14842 300 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 FSHBP01225 129 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 CST2P09228 141 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 PSG4Q00888 419 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 LIPEQ05469 1076 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 FHL1Q13642 323 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 TSTQ16762 297 aaKnown RBP10.66□□□□□ -0.7
VEGFA-216ENST00000512683 HSP90B2PQ58FF3 399 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 AVPI1Q5T686 147 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 FAM205BPQ63HN1 556 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 THSD4Q6ZMP0 1018 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 VTCN1Q7Z7D3 282 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 LRRC18Q8N456 261 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 SAMD8Q96LT4 415 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 COG8Q96MW5 612 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 GAL3ST1Q99999 423 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 ZNF696Q9H7X3 374 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 MAN2C1Q9NTJ4 1040 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
VEGFA-216ENST00000512683 TENM1Q9UKZ4 2725 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 C5orf49A4QMS7 147 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 J3KTA2 159 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 SPRY3O43610 288 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 AHCYL1O43865 530 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 CCDC22O60826 627 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 PRSS23O95084 383 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 HKR1P10072 659 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 COX5BP10606 129 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ZNF32P17041 273 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 CCNOP22674 350 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 TNFSF4P23510 183 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ERVS71-1P61550 626 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 UBA52P62987 128 aaKnown RBP10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 CDK5R2Q13319 367 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 SGCAQ16586 387 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 TMEM155Q4W5P6 130 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 AWAT1Q58HT5 328 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 PRR31Q5SQ13 230 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ARPINQ7Z6K5 226 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 SPICQ8N5J4 248 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ZDHHC22Q8N966 263 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 ICA1LQ8NDH6 482 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 DVL3Q92997 716 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-216ENST00000512683 NABP1Q96AH0 204 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 HOPXQ9BPY8 73 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-216ENST00000512683 TBCCD1Q9NVR7 557 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 OPN4Q9UHM6 478 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 NDRG4Q9ULP0 352 aaKnown RBP10.65□□□□□ -0.7
VEGFA-216ENST00000512683 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 AP3M1Q9Y2T2 418 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 UGT2A1Q9Y4X1 527 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 NPTNQ9Y639 398 aa10.65□□□□□ -0.7
VEGFA-216ENST00000512683 LOC100509620A0A075B734 347 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 IGKV1D-43A0A0B4J1Z2 117 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 POM121CA8CG34 1229 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 CXCR6O00574 342 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 SURF4O15260 269 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 TNFRSF1AP19438 455 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 MAKP20794 623 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 WNT5AP41221 380 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 YAP1P46937 504 aaKnown RBP10.64□□□□□ -0.71
VEGFA-216ENST00000512683 GSK3BP49841 420 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 SLC7A2P52569 658 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 RPL27P61353 136 aaKnown RBP10.64□□□□□ -0.71
VEGFA-216ENST00000512683 PPP1CBP62140 327 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 MTX3Q5HYI7 312 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 HACD2Q6Y1H2 254 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 FOXL2NBQ6ZUU3 175 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 CBLL1Q75N03 491 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 DOK3Q7L591 496 aa10.64□□□□□ -0.71
VEGFA-216ENST00000512683 TSEN54Q7Z6J9 526 aaKnown RBP10.64□□□□□ -0.71
VEGFA-216ENST00000512683 ZNF101Q8IZC7 436 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms