RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM19Q96HH6 336 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF285Q96NJ3 590 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR2V2Q96R30 315 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 SPATA25Q9BR10 227 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 GLIPR2Q9H4G4 154 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 TLE6Q9H808 572 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 C19orf73Q9NVV2 129 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 ASIC5Q9NY37 505 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF319Q9P2F9 582 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 SIRT4Q9Y6E7 314 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 BRCA1P38398 1863 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 COL4A5P29400 1685 aa5.47□□□□□ -1.53
TRAPPC11-209ENST00000512476 FOCADQ5VW36 1801 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC16A4O15374 487 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 EIF1BO60739 113 aaKnown RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 TIMP1P01033 207 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 PPBPP02775 128 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC35G4P0C7Q5 338 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 PSMA1P25786 263 aaKnown RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 HTR1FP30939 366 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 EIF1P41567 113 aaKnown RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 AP1S2P56377 157 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 TAS2R41P59536 307 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR2B8PP59922 312 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 BLOC1S1P78537 153 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 IL5RAQ01344 420 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 CHRNEQ04844 493 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 TCEAL6Q6IPX3 200 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 COX8CQ7Z4L0 72 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 BCDIN3DQ7Z5W3 292 aaKnown RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 NET1Q7Z628 596 aaPredicted RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 RNF149Q8NC42 400 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 EME1Q96AY2 570 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 NUS1Q96E22 293 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF641Q96N77 438 aaPredicted RBP5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 STACQ99469 402 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 TMEM208Q9BTX3 173 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 MFSD1Q9H3U5 465 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 RNF121Q9H920 327 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 NMUR1Q9HB89 426 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 SH2D2AQ9NP31 389 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 A4GALTQ9NPC4 353 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC2A9Q9NRM0 540 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 RNF186Q9NXI6 227 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC17A6Q9P2U8 582 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 VPREB3Q9UKI3 123 aa5.46□□□□□ -1.53
TRAPPC11-209ENST00000512476 PSME4Q14997 1843 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 NID2Q14112 1375 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARPC1BO15143 372 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 BET1O15155 118 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 LAMTOR5O43504 91 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 SMIM24O75264 130 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 MPDU1O75352 247 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 KRT33AO76009 404 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR8U9P0C7N5 309 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 SSTR5P35346 364 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 GLIPR1P48060 266 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 CDK9P50750 372 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 CCR6P51684 374 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 LTBQ06643 244 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 TAF10Q12962 218 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 PRPSAP1Q14558 356 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 ATP6V1FQ16864 119 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 ODF4Q2M2E3 257 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 ELFN2Q5R3F8 820 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 MED27Q6P2C8 311 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 PRUNE1Q86TP1 453 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 HORMAD1Q86X24 394 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 STPG2Q8N412 459 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM151AQ8N4L1 468 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 SMIM20Q8N5G0 67 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR1M1Q8NGA1 313 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR4D9Q8NGE8 314 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 RAB8BQ92930 207 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 RERGQ96A58 199 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 FKBP10Q96AY3 582 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 SDHCQ99643 169 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 APOOQ9BUR5 198 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 TM2D2Q9BX73 214 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 YTHDF1Q9BYJ9 559 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 VN1R1Q9GZP7 353 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 PELI2Q9HAT8 420 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 FGFR1OP2Q9NVK5 253 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 IMPAD1Q9NX62 359 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 PURGQ9UJV8 347 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 NUBP2Q9Y5Y2 271 aa5.46□□□□□ -1.54
TRAPPC11-209ENST00000512476 CNTNAP1P78357 1384 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 VPS37CA5D8V6 355 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 UGT2B17O75795 530 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 CATP04040 527 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 GABRG2P18507 467 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 AOC1P19801 751 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 DCTP40126 519 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 UGT2B15P54855 530 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 CLDN17P56750 224 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 CNTN1Q12860 1018 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 ASAH1Q13510 395 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 MS4A18Q3C1V0 323 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 LRRC37A5PQ49AS3 106 aa5.45□□□□□ -1.54
TRAPPC11-209ENST00000512476 C1QL3Q5VWW1 255 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms