RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ABHD16AO95870 558 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 SERPINA3P01011 423 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 KRT8P05787 483 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 HSMCR30P0CW71 290 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF823P16415 610 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 RFC3P40938 356 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 NAA10P41227 235 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF84P51523 738 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 CCR9P51686 369 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ADAM8P78325 824 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 NFATC3Q12968 1075 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 TBR1Q16650 682 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 OR2G6Q5TZ20 316 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 DMKNQ6E0U4 476 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 PAMR1Q6UXH9 720 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 USP43Q70EL4 1123 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ABHD12BQ7Z5M8 362 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 MRPL41Q8IXM3 137 aaKnown RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF679Q8IYX0 411 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 OR10H5Q8NGA6 315 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 OR6N1Q8NGY5 312 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 OR6N2Q8NGY6 317 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 OR52N5Q8NH56 324 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 CPT1CQ8TCG5 803 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 SPRYD4Q8WW59 207 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ZNRF4Q8WWF5 429 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 MCHR2Q969V1 340 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 SMIM19Q96E16 107 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 PELI1Q96FA3 418 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 C4orf36Q96KX1 117 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 KCNN2Q9H2S1 579 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 EXO5Q9H790 373 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 MRPL22Q9NWU5 206 aaKnown RBP8.05□□□□□ -1.12
NR1I3-230ENST00000511944 ATPIF1Q9UII2 106 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 SSR3Q9UNL2 185 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 GSTK1Q9Y2Q3 226 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 CSAG2Q9Y5P2 127 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 CFAP54Q96N23 3096 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 PCNX3Q9H6A9 2034 aa8.05□□□□□ -1.12
NR1I3-230ENST00000511944 PIEZO1Q92508 2521 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 TRDV1A0A1B0GX56 115 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 AHRRA9YTQ3 701 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF593O00488 134 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 DHHO43323 396 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 TMEM127O75204 238 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 GATBO75879 557 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 HLA-DQA2P01906 255 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 OPN1LWP04000 364 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 YES1P07947 543 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MRPL3P09001 348 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 QDPRP09417 244 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 GABRA1P14867 456 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MSR1P21757 451 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 GADD45AP24522 165 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 SERPINB10P48595 397 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 STARP49675 285 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 SIRPAP78324 504 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CAMK2DQ13557 499 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CDK5R1Q15078 307 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 C1QTNF12Q5T7M4 302 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 OR2A2Q6IF42 318 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 B3GLCTQ6Y288 498 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF627Q7L945 461 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 AAED1Q7RTV5 226 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 DPY19L4Q7Z388 723 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 DPPA2Q7Z7J5 298 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MCEMP1Q8IX19 187 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 GHDCQ8N2G8 530 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 RBMXL3Q8N7X1 1067 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 SYT14Q8NB59 555 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 OR51L1Q8NGJ5 315 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 RNF133Q8WVZ7 376 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 DNAJA3Q96EY1 480 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 GMPPAQ96IJ6 420 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ZFP3Q96NJ6 502 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF385AQ96PM9 386 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 OR8B4Q96RC9 309 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MED18Q9BUE0 208 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 EMC6Q9BV81 110 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MROQ9BYG7 248 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ULBP2Q9BZM5 246 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 NELFAQ9H3P2 528 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 MOB1AQ9H8S9 216 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CALHM2Q9HA72 323 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 POLE4Q9NR33 117 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 SPRR3Q9UBC9 169 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CLCF1Q9UBD9 225 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ST6GALNAC2Q9UJ37 374 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ING1Q9UK53 422 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 COPS3Q9UNS2 423 aa8.04□□□□□ -1.12
NR1I3-230ENST00000511944 COA3Q9Y2R0 106 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 SF3B6Q9Y3B4 125 aaKnown RBP8.04□□□□□ -1.12
NR1I3-230ENST00000511944 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms