RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 OMGP23515 440 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 BCAP31P51572 246 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 RPS15AP62244 130 aaKnown RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 HNRNPA1L2Q32P51 320 aaKnown RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 TTLL9Q3SXZ7 439 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZBED5Q49AG3 693 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 CCNJQ5T5M9 372 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 AADACL4Q5VUY2 407 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ULK3Q6PHR2 472 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 MBOAT1Q6ZNC8 495 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF621Q6ZSS3 439 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 CBLN2Q8IUK8 224 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 MREGQ8N565 214 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 FAM71E2Q8N5Q1 922 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR4S2Q8NH73 311 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ACER1Q8TDN7 264 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 GIMAP1Q8WWP7 306 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ECHDC3Q96DC8 303 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 COL21A1Q96P44 957 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR2AG1Q9H205 316 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 PIGUQ9H490 435 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ACP6Q9NPH0 428 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 IL17CQ9P0M4 197 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF282Q9UDV7 671 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF629Q9UEG4 869 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 NUFIP1Q9UHK0 495 aaKnown RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF225Q9UK10 706 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 TP53TG3Q9ULZ0 132 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ST3GAL6Q9Y274 331 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 TRAPPC4Q9Y296 219 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ATRXP46100 2492 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 ADGRA3Q8IWK6 1321 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 PDS5BQ9NTI5 1447 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 HAT1O14929 419 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 ERI3O43414 337 aaKnown RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 FLOT1O75955 427 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 RAB3DO95716 219 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 LSM8O95777 96 aaKnown RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 CSTAP01040 98 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 OXTP01178 125 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 INSP01308 110 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 ATF6P18850 670 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 RAB4AP20338 218 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 F2RP25116 425 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 NUDT1P36639 197 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 RBMXP38159 391 aaKnown RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 TAF6P49848 677 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 CCNG1P51959 295 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 NCBP2P52298 156 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 WNT4P56705 351 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 SEMG2Q02383 582 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 TRMT5Q32P41 509 aaKnown RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 RNF212Q495C1 297 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 FBXL22Q6P050 247 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 ABHD13Q7L211 337 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 STRADAQ7RTN6 431 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 DCAF4L2Q8NA75 395 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 GATSQ8NAP1 163 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR5T3Q8NGG3 340 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 KIAA1143Q96AT1 154 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 FAM3DQ96BQ1 224 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 GALNT14Q96FL9 552 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 WFIKKN1Q96NZ8 548 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 CLMPQ9H6B4 373 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 XKR8Q9H6D3 395 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 KCNJ16Q9NPI9 418 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 AGPAT4Q9NRZ5 378 aa3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 YARS2Q9Y2Z4 477 aaKnown RBP3.72□□□□□ -1.81
HMGB1P47-201ENST00000511281 A0A1B0GW55 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 PLAC8L1A1L4L8 177 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 NDUFS8O00217 210 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLC9A3R1O14745 358 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 XRCC2O43543 280 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 KDELR3O43731 214 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 FARS2O95363 451 aaKnown RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 IGLV2-23P01705 113 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 GIPP09681 153 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L2P0CJ85 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L3P0CJ86 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L4P0CJ87 422 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L5P0CJ88 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L6P0CJ89 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L7P0CJ90 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF30P17039 623 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 RCC1P18754 421 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 UBE2MP61081 183 aaKnown RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF33AQ06730 810 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 PSG7Q13046 419 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 IFT88Q13099 833 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 PRPSAP1Q14558 356 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 QPRTQ15274 297 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF79Q15937 498 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 MLIPQ5VWP3 458 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4L9Q6RFH8 374 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 PDCL2Q8N4E4 241 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ACTRT1Q8TDG2 376 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 EEF1AKMT3Q96AZ1 226 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 C19orf60Q96EN9 201 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM175Q9BSA9 504 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms