RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 ZNF136P52737 540 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 GNB2P62879 340 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CATR1Q13166 79 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CLN3Q13286 438 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 WDR74Q6RFH5 385 aaPredicted RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 Q6ZTK2 550 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 USP51Q70EK9 711 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 DOK3Q7L591 496 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PDZD9Q8IXQ8 264 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CARFQ8N187 725 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 RNF128Q8TEB7 428 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CA5BP1Q8WTZ4 195 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 DCUN1D4Q92564 292 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 HES7Q9BYE0 225 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 QPCTLQ9NXS2 382 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 SLC25A37Q9NYZ2 338 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CD300AQ9UGN4 299 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 DIMT1Q9UNQ2 313 aaKnown RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 HDGFL3Q9Y3E1 203 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PCDHGA5Q9Y5G8 931 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 SPINT2O43291 252 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PAPLNO95428 1278 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 ATP1B1P05026 303 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 RAB40ALP0C0E4 278 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 CCL4P13236 92 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PRPH2P23942 346 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 TGM4P49221 684 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 FABP6P51161 128 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 SNRPD2P62316 118 aaKnown RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 YIF1BQ5BJH7 314 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 C12orf45Q8N5I9 185 aaPredicted RBP6.52□□□□□ -1.37
KDM3B-207ENST00000510866 GPR119Q8TDV5 335 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 RAB40AQ8WXH6 277 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 ACKR4Q9NPB9 350 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 PSORS1C1Q9UIG5 152 aa6.52□□□□□ -1.37
KDM3B-207ENST00000510866 TRIP12Q14669 1992 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ARPC1BO15143 372 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SLC22A5O76082 557 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 MT-CO2P00403 227 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 GSTP1P09211 210 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SNRPBP14678 240 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 HCCSP53701 268 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 TAS2R20P59543 309 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 RPL23AP62750 156 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 CCBE1Q6UXH8 406 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 S1PR5Q9H228 398 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SERTAD4Q9NUC0 356 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ACER3Q9NUN7 267 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 NUBP2Q9Y5Y2 271 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 NUMA1Q14980 2115 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SC5DO75845 299 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 LAP3P28838 519 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 GK2Q14410 553 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 FGFBP1Q14512 234 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 STPG1Q5TH74 334 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 PMS2CLQ68D20 193 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ZNF547Q8IVP9 402 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SLC15A4Q8N697 577 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ARIH2OSQ8N7S6 290 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 OR4M1Q8NGD0 313 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 LRRC3BQ96PB8 259 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 BARHL1Q9BZE3 327 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ARL6Q9H0F7 186 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 IGHV5-10-1A0A0J9YXX1 117 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 RAB19A4D1S5 217 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SLC16A6O15403 523 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 LILRB5O75023 590 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 OR8U9P0C7N5 309 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 B4GALT1P15291 398 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 HOXD12P35452 270 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 YBX1P67809 324 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 PAN3Q58A45 887 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 JMJD6Q6NYC1 403 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 LRRC28Q86X40 367 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 TMEM102Q8N9M5 508 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 OR51E1Q8TCB6 317 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SLCO4A1Q96BD0 722 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SDSLQ96GA7 329 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 B3GALT5Q9Y2C3 310 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 A0A1W2PQF6 199 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 F5H5P2 479 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 BHLHE40O14503 412 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SLC2A10O95528 541 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SHC1P29353 583 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 F2RL1P55085 397 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 CLDN6P56747 220 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 MSMO1Q15800 293 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 PIWIL3Q7Z3Z3 882 aaKnown RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 SYT9Q86SS6 491 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 CCDC71Q8IV32 467 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 PLPP7Q8NBV4 271 aa6.51□□□□□ -1.37
KDM3B-207ENST00000510866 FAM83FQ8NEG4 500 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-207ENST00000510866 DEFB108BQ8NET1 73 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms