RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TSSK6Q9BXA6 273 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NMNAT2Q9BZQ4 307 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NUAK2Q9H093 628 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 RNF121Q9H920 327 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 MED20Q9H944 212 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 TMEM38BQ9NVV0 291 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CRNNQ9UBG3 495 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 FKBP7Q9Y680 259 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NF1P21359 2839 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NIPBLQ6KC79 2804 aaeCLIP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 FAM183AA6NL82 134 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 B9A039 149 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 G3V2T6 193 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 H7C417 338 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 UBL3O95164 117 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 IGKV3-15P01624 115 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 IGLV1-44P01699 117 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 TFP02787 698 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 GYPBP06028 91 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 ERCC1P07992 297 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 MMP7P09237 267 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 OR8G3PP0DMU2 310 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 OSMP13725 252 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 APEHP13798 732 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF23P17027 643 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 NPR2P20594 1047 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 PEX2P28328 305 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC6A6P31641 620 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 THBS4P35443 961 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 GIPRP48546 466 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF84P51523 738 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 EFNA4P52798 201 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 RAB1AP62820 205 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 GALK2Q01415 458 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 CD47Q08722 323 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 DAG1Q14118 895 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 CRMP1Q14194 572 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 GK3PQ14409 553 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 RCN1Q15293 331 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 TMEM255AQ5JRV8 349 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 LINC01590Q5TEZ4 76 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 LPCAT4Q643R3 524 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 KRT80Q6KB66 452 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 ZFP1Q6P2D0 407 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 LEG1Q6P5S2 330 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 BCDIN3DQ7Z5W3 292 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 LINC00471Q8N535 108 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 BBS1Q8NFJ9 593 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 OR52E2Q8NGJ4 325 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 OR9Q1Q8NGQ5 310 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 FAM168AQ92567 244 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 PTP4A1Q93096 173 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 UBE2FQ969M7 185 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 POM121Q96HA1 1249 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 MS4A3Q96HJ5 214 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 ALG12Q9BV10 488 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 IFT27Q9BW83 186 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 RBM4Q9BWF3 364 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 KCNN2Q9H2S1 579 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 HEATR1Q9H583 2144 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 DYNLRB1Q9NP97 96 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 EMC7Q9NPA0 242 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 TBC1D23Q9NUY8 699 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 MRPL22Q9NWU5 206 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 STX18Q9P2W9 335 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 AASSQ9UDR5 926 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 FBXL3Q9UKT7 428 aa7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 COA3Q9Y2R0 106 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-213ENST00000509357 IGHV2OR16-5A0A0B4J2B6 119 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ZAR1LA6NP61 321 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CENPBD1B2RD01 187 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SURF4O15260 269 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PRKYO43930 277 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CSF3P09919 207 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 FCGR1AP12314 374 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ANXA8P13928 327 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ANPEPP15144 967 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC2A5P22732 501 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PYCR1P32322 319 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 IFNGR2P38484 337 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 RPS27P42677 84 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 GUCA1AP43080 201 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CRISP1P54107 249 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 HGFACQ04756 655 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SNTB2Q13425 540 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 GINS1Q14691 196 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 RAB39AQ14964 217 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 TAF11Q15544 211 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ADIPOQQ15848 244 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC36A2Q495M3 483 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 C12orf73Q69YU5 71 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC16A14Q7RTX9 510 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms