RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 EMC3Q9P0I2 261 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 ABI3Q9P2A4 366 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 ITGB1BP2Q9UKP3 347 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 CACNG2Q9Y698 323 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 MPDZO75970 2070 aa8.25□□□□□ -1.09
HTT-205ENST00000509043 ASCC3Q8N3C0 2202 aaKnown RBP8.25□□□□□ -1.09
HTT-205ENST00000509043 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 A0A0A6YYH2 397 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TMEM269A0A1B0GVZ9 245 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 A6NJ64 397 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 ZNF878C9JN71 531 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 ACOT7O00154 380 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 SLC17A2O00624 439 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 EEF1E1O43324 174 aaKnown RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 SSX4O60224 188 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 GDF9O60383 454 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 ZIC3O60481 467 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 DHFRP00374 187 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 CCL3P10147 92 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 SOX2P48431 317 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 AGFG1P52594 562 aaKnown RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 GRB2P62993 217 aaKnown RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 SSBP1Q04837 148 aaKnown RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 GPR176Q14439 515 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 RAB11BQ15907 218 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 ETFDHQ16134 617 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 C10orf128Q5T292 105 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 HES5Q5TA89 166 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 BCL2L15Q5TBC7 163 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 OR7E24Q6IFN5 339 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TCEAL6Q6IPX3 200 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 LRRC69Q6ZNQ3 347 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TMPRSS12Q86WS5 348 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 CMTM4Q8IZR5 234 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 KDM8Q8N371 416 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 CCDC54Q8NEL0 328 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 FCAMRQ8WWV6 532 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 C11orf40Q8WZ69 217 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TCEAL3Q969E4 200 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 YIPF5Q969M3 257 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 SLC25A18Q9H1K4 315 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 PROK2Q9HC23 129 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TMEM9BQ9NQ34 198 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 TAS2R8Q9NYW2 309 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 OR5V1Q9UGF6 321 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 OR52A1Q9UKL2 312 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 PAIP2BQ9ULR5 123 aaKnown RBP8.24□□□□□ -1.09
HTT-205ENST00000509043 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 NUBP2Q9Y5Y2 271 aa8.24□□□□□ -1.09
HTT-205ENST00000509043 COL27A1Q8IZC6 1860 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 TEX51A0A1B0GUA7 166 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 LINC00854A0A1B0GVQ3 168 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 OR2M5A3KFT3 312 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SHISA8B8ZZ34 492 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 CDX4O14627 284 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 GPANK1O95872 356 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 MT-CO3P00414 261 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 PNPP00491 289 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 APOC1P02654 83 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 ERCC1P07992 297 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 CELA2AP08217 269 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 IGFBP3P17936 291 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 ADRA2CP18825 462 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 OTX2P32243 289 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 CASRP41180 1078 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 DNASE1L1P49184 302 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 CYB561P49447 251 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SUCLG1P53597 346 aaKnown RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 RAC3P60763 192 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 FMODQ06828 376 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SLC36A2Q495M3 483 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 PLA1AQ53H76 456 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 ACER2Q5QJU3 275 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 TMEM69Q5SWH9 247 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 RAET1LQ5VY80 246 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 ANKRD16Q6P6B7 361 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 DNM1P46Q6ZS02 220 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 FOXL2NBQ6ZUU3 175 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SPATC1Q76KD6 591 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 LINGO2Q7L985 606 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 GPAT4Q86UL3 456 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 CDH26Q8IXH8 852 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 ELMOD2Q8IZ81 293 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 OR6M1Q8NGM8 313 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 OR6F1Q8NGZ6 308 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 ASB5Q8WWX0 329 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SLC7A6Q92536 515 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SLC25A38Q96DW6 304 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 DNAJA3Q96EY1 480 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 MMP28Q9H239 520 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 SMOC1Q9H4F8 434 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 G6PC2Q9NQR9 355 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 DIABLOQ9NR28 239 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 P4HTMQ9NXG6 502 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms