RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PCK2Q16822 640 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 FBXL19-AS1Q494R0 122 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CORO6Q6QEF8 472 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 TUBA1AQ71U36 451 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CDC20BQ86Y33 519 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 SLC35F2Q8IXU6 374 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 ZNF808Q8N4W9 903 aaPredicted RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 RFLNBQ8N5W9 214 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 ZNF540Q8NDQ6 660 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 C1orf162Q8NEQ5 155 aaPredicted RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CA5BP1Q8WTZ4 195 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 FBXO17Q96EF6 278 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 NOX3Q9HBY0 568 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CNOT2Q9NZN8 540 aaKnown RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 KCNG2Q9UJ96 466 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 POLR1DQ9Y2S0 133 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 KLHDC2Q9Y2U9 406 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CACNA1CQ13936 2221 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 A0A1W2PR80 420 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 EFCAB10A6NFE3 127 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 PTGES3LE9PB15 166 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 FARS2O95363 451 aaKnown RBP12.4□□□□□ -0.42
RNF4-208ENST00000507247 WNT11O96014 354 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 RNF224P0DH78 156 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 AGAP20933 346 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
RNF4-208ENST00000507247 ATP6V1E1P36543 226 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 CHN2P52757 468 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 SLC35A2P78381 396 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 TFF3Q07654 80 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 SRSF1Q07955 248 aaKnown RBP eCLIP12.4□□□□□ -0.424e-6■□□□□ 8.1
RNF4-208ENST00000507247 RAB40BQ12829 278 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 TEX30Q5JUR7 227 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 SLC18B1Q6NT16 456 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 XKRXQ6PP77 449 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 SLC16A14Q7RTX9 510 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 WDR31Q8NA23 367 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 OTOSQ8NHW6 89 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 TBX5Q99593 518 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 TTTY10Q9BZA0 68 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 YIPF3Q9GZM5 350 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 FGF20Q9NP95 211 aaPredicted RBP12.4□□□□□ -0.42
RNF4-208ENST00000507247 SLC17A5Q9NRA2 495 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 SCN3BQ9NY72 215 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 ASH2LQ9UBL3 628 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 TPRKBQ9Y3C4 175 aa12.4□□□□□ -0.42
RNF4-208ENST00000507247 RELNP78509 3460 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 PRR32B1ATL7 298 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 CLDN14O95500 239 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 IGHA1P01876 353 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 HLA-HP01893 362 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 HTR1AP08908 422 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 ZNF32P17041 273 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 ALOX5APP20292 161 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 IL32P24001 234 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 UGT2B10P36537 528 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 ZNF85Q03923 595 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 AQP6Q13520 282 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 EIF2B1Q14232 305 aaKnown RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 OR7E24Q6IFN5 339 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 CFAP77Q6ZQR2 320 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 SSX6Q7RTT6 188 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 DCXRQ7Z4W1 244 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 C17orf78Q8N4C9 275 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 OR10H4Q8NGA5 316 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 OR10S1Q8NGN2 331 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 S100PBPQ96BU1 408 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 SIGLEC11Q96RL6 698 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 AMELYQ99218 206 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 ZNF649Q9BS31 505 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 COPS4Q9BT78 406 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
RNF4-208ENST00000507247 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 DIMT1Q9UNQ2 313 aaKnown RBP12.39□□□□□ -0.43
RNF4-208ENST00000507247 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
RNF4-208ENST00000507247 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 ARPC4-TTLL3A0A0A6YYG9 625 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
RNF4-208ENST00000507247 TRIM64A6NGJ6 449 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 OR5H1A6NKK0 313 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 RER1O15258 196 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 RAB36O95755 333 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 FADS2O95864 444 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms